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View Structure Prediction Details

Protein: FIN1
Organism: Saccharomyces cerevisiae
Length: 291 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FIN1.

Description E-value Query
Range
Subject
Range
FIN1_YEAST - Filament protein FIN1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=FIN1 PE=1 SV=1
gi|207346697 - gi|207346697|gb|EDZ73118.1| YDR130Cp-like protein [Saccharomyces cerevisiae AWRI1631]
FIN1 - Spindle pole body-related intermediate filament protein; forms cell cycle-specific filaments between...
0.0 [1..291] [1..291]

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Predicted Domain #1
Region A:
Residues: [1-291]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSNKSNRRSL RDIGNTIGRN NIPSDKDNVF VRLSMSPLRT TSQKEFLKPP MRISPNKTDG  60
   61 MKHSIQVTPR RIMSPECLKG YVSKETQSLD RPQFKNSNKN VKIQNSDHIT NIIFPTSPTK 120
  121 LTFSNENKIG GDGSLTRIRA RFKNGLMSPE RIQQQQQQHI LPSDAKSNTD LCSNTELKDA 180
  181 PFENDLPRAK LKGKNLLVEL KKEEEDVGNG IESLTKSNTK LNSMLANEGK IHKASFQKSV 240
  241 KFKLPDNIVT EETVELKEIK DLLLQMLRRQ REIESRLSNI ELQLTEIPKH K

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle