Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YDR090C.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..310] | [1..310] |
|
|
4.0E-53 | [1..215] | [1..270] |
|
|
1.0E-51 | [3..212] | [15..222] |
|
|
4.0E-47 | [9..221] | [129..358] |
|
|
7.0E-47 | [9..221] | [129..358] |
|
|
2.0E-45 | [9..220] | [131..359] |
|
|
2.0E-43 | [3..245] | [7..286] |
|
|
1.0E-42 | [7..221] | [132..363] |
|
Region A: Residues: [1-256] |
1 11 21 31 41 51
| | | | | |
1 MISEKAATAL ATIATVCWCV QLIPQIIYNW KKKDCTGLPP LMMFLWVVSG IPFAIYFCVS 60
61 KGNVILQVQP HLFMFFCSIS FVQSCYYPPI SMARSKIVMI VAAIIAADVG MEVGFILWLR 120
121 PLYEKGVKWP DLIFGISASV LLAVGLLPPY FELAKRKGRV IGINFAFLFI DSLGAWLSII 180
181 SVILGNMDIM GIILYSIVAG MELGIFASHF IWWCRFRFLA KGNTFDEESG QAQKEEPDEK 240
241 IEQDISKSDR NVTNYN
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [257-310] |
1 11 21 31 41 51
| | | | | |
1 LDNCSIPDDA SSFADDFNIY DSTDGGTLSR AQTLHAVHGV VVRTDPDRYS RLSV
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.809 | 0.116 | integral to membrane | a.140.1 | LEM domain |
|
Region A: Residues: [225-310] |
1 11 21 31 41 51
| | | | | |
1 FDEESGQAQK EEPDEKIEQD ISKSDRNVTN YNLDNCSIPD DASSFADDFN IYDSTDGGTL 60
61 SRAQTLHAVH GVVVRTDPDR YSRLSV
|
| Detection Method: | |
| Confidence: | 0.954 |
| Match: | 1qd7B |
| Description: | 30S subunit |
Matching Structure (courtesy of the PDB): |
|
