Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YDR090C.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..310] | [1..310] |
|
|
4.0E-53 | [1..215] | [1..270] |
|
|
1.0E-51 | [3..212] | [15..222] |
|
|
4.0E-47 | [9..221] | [129..358] |
|
|
7.0E-47 | [9..221] | [129..358] |
|
|
2.0E-45 | [9..220] | [131..359] |
|
|
2.0E-43 | [3..245] | [7..286] |
|
|
1.0E-42 | [7..221] | [132..363] |
|
Region A: Residues: [1-256] |
1 11 21 31 41 51
| | | | | |
1 MISEKAATAL ATIATVCWCV QLIPQIIYNW KKKDCTGLPP LMMFLWVVSG IPFAIYFCVS 60
61 KGNVILQVQP HLFMFFCSIS FVQSCYYPPI SMARSKIVMI VAAIIAADVG MEVGFILWLR 120
121 PLYEKGVKWP DLIFGISASV LLAVGLLPPY FELAKRKGRV IGINFAFLFI DSLGAWLSII 180
181 SVILGNMDIM GIILYSIVAG MELGIFASHF IWWCRFRFLA KGNTFDEESG QAQKEEPDEK 240
241 IEQDISKSDR NVTNYN
|
| Detection Method: |  |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [257-310] |
1 11 21 31 41 51
| | | | | |
1 LDNCSIPDDA SSFADDFNIY DSTDGGTLSR AQTLHAVHGV VVRTDPDRYS RLSV
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.809 | 0.116 | integral to membrane | a.140.1 | LEM domain |
| View | Download | 0.590 | 0.116 | integral to membrane | a.4.6 | C-terminal effector domain of the bipartite response regulators |
| View | Download | 0.608 | 0.116 | integral to membrane | a.16.1 | S15/NS1 RNA-binding domain |
| View | Download | 0.792 | 0.116 | integral to membrane | a.157.1 | Skp1 dimerisation domain-like |
| View | Download | 0.530 | 0.116 | integral to membrane | a.22.1 | Histone-fold |
| View | Download | 0.527 | 0.116 | integral to membrane | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.522 | 0.116 | integral to membrane | a.44.1 | Disulphide-bond formation facilitator (DSBA), insertion domain |
| View | Download | 0.492 | 0.116 | integral to membrane | a.144.2 | Ribosomal protein L20 |
| View | Download | 0.476 | 0.116 | integral to membrane | a.5.1 | DNA helicase RuvA subunit, C-terminal domain |
| View | Download | 0.448 | 0.116 | integral to membrane | a.35.1 | lambda repressor-like DNA-binding domains |
| View | Download | 0.442 | 0.116 | integral to membrane | f.13.1 | Family A G protein-coupled receptor-like |
| View | Download | 0.412 | 0.116 | integral to membrane | a.64.1 | Saposin |
| View | Download | 0.374 | 0.116 | integral to membrane | a.140.2 | SAP domain |
| View | Download | 0.326 | 0.116 | integral to membrane | a.28.3 | Retrovirus capsid protein C-terminal domain |
| View | Download | 0.298 | 0.116 | integral to membrane | a.31.1 | Dimerization-anchoring domain of cAMP-dependent type II PK regulatory subunit |
| View | Download | 0.297 | 0.116 | integral to membrane | a.21.1 | HMG-box |
| View | Download | 0.294 | 0.116 | integral to membrane | a.65.1 | Annexin |
| View | Download | 0.274 | 0.116 | integral to membrane | a.17.1 | p8-MTCP1 |
| View | Download | 0.255 | 0.116 | integral to membrane | a.60.3 | C-terminal domain of RNA polymerase alpha subunit |
| View | Download | 0.244 | 0.116 | integral to membrane | a.46.2 | Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain |
| View | Download | 0.230 | 0.116 | integral to membrane | a.4.8 | Ribosomal protein S18 |
| View | Download | 0.227 | 0.116 | integral to membrane | a.4.1 | Homeodomain-like |
| View | Download | 0.201 | 0.116 | integral to membrane | a.46.2 | Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain |
|
Region A: Residues: [225-310] |
1 11 21 31 41 51
| | | | | |
1 FDEESGQAQK EEPDEKIEQD ISKSDRNVTN YNLDNCSIPD DASSFADDFN IYDSTDGGTL 60
61 SRAQTLHAVH GVVVRTDPDR YSRLSV
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| Detection Method: | |
| Confidence: | 0.954 |
| Match: | 1qd7B |
| Description: | 30S subunit |
Matching Structure (courtesy of the PDB): |
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