Protein: | SNF11 |
Organism: | Saccharomyces cerevisiae |
Length: | 169 amino acids |
Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SNF11.
Description | E-value | Query Range |
Subject Range |
|
81.0 | [0..63] | [168..35] |
|
67.0 | [0..60] | [169..20] |
Region A: Residues: [1-169] |
1 11 21 31 41 51 | | | | | | 1 MSSEIAYSNT NTNTENENRN TGAGVDVNTN ANANANATAN ATANATANAT AELNLPTVDE 60 61 QRQYKVQLLL HINSILLARV IQMNNSLQNN LQNNINNSNN NNIIRIQQLI SQFLKRVHAN 120 121 LQCISQINQG VPSAKPLILT PPQLANQQQP PQDILSKLYL LLARVFEIW |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
MCM Score |
SCOP Match |
SCOP Description | ||
View | Download | 0.548 | a.29.3 | Acyl-CoA dehydrogenase C-terminal domain-like |
View | Download | 0.543 | a.24.9 | alpha-catenin/vinculin |
View | Download | 0.505 | a.29.3 | Acyl-CoA dehydrogenase C-terminal domain-like |
View | Download | 0.496 | f.25.1 | Cytochrome c oxidase subunit III-like |
View | Download | 0.496 | f.25.1 | Cytochrome c oxidase subunit III-like |
View | Download | 0.474 | a.24.9 | alpha-catenin/vinculin |
View | Download | 0.474 | a.47.2 | t-snare proteins |
View | Download | 0.445 | a.29.3 | Acyl-CoA dehydrogenase C-terminal domain-like |
View | Download | 0.395 | a.26.1 | 4-helical cytokines |
View | Download | 0.390 | a.29.3 | Acyl-CoA dehydrogenase C-terminal domain-like |
View | Download | 0.238 | f.31.1 | Photosystem I reaction center subunit XI, PsaL |
View | Download | 0.216 | a.25.1 | Ferritin-like |