| Protein: | MAK21 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 1025 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for MAK21.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..1025] | [1..1025] |
|
|
0.0 | [29..968] | [17..933] |
|
|
0.0 | [174..1021] | [2..859] |
|
|
0.0 | [39..856] | [1..793] |
|
|
0.0 | [123..908] | [11..796] |
|
|
0.0 | [82..701] | [2..636] |
|
|
0.0 | [303..805] | [16..499] |
|
Region A: Residues: [1-213] |
1 11 21 31 41 51
| | | | | |
1 MSENNGNPLD LSSLRNKISS KLRDNNSKKA KKTHKGKDVK ASSNSKKVNE DIRREALALG 60
61 ASEEDLKLIQ GLSDDDDAKS EQEFDAVADE DADDKGFKND LQNFMKNVGF DQHKLEDVDD 120
121 DDIEEESTSS KESKIPAQEK EHAQSNIASS TIEKTSQESI DNGSEQEENT VEEANLSSDQ 180
181 EPESESAEKE KKEEKDGGLI TQTTIISSDK LII
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [214-922] |
1 11 21 31 41 51
| | | | | |
1 PYDKPWYEIP LDPQVGQNDD VEELSKEQIE KLFERGKQTL EADNQTYYEE FTKDSSQAKF 60
61 MSQILSDGTL NDKISAVTLL IQDSPLHNTK SLETLVSYCG KKSRNSALQS LNALKDLFLN 120
121 GLLPNRKLRY FKNQPGLSMM LNKKTLAIFY FEDYLKKLFF RVLEVLEVLS HDPIIHVRLQ 180
181 ILNHVFDLLT NQPEQEFNLL RLGVNKIGDI DSKVSSKASY LLLKLEQAHP NMKSIVIDAI 240
241 VDIALRPNAD YHTTYYSVIT LNQTILKRSE DSVANKLVKT YFTLFEKFLI NTDKDNTNGV 300
301 VKSNSKSYEE KRKKNFKKGK HGGKSVKIEK TENEVLDEKN SKLFSALLTG INRAFPFAQI 360
361 PASVYEVHME TLFKITHSSN FNTSIQALVL INQVTVKAKL NSDRYYRTLY ESLFDPRLVN 420
421 SSKQGIYLNL LYKSLKQDAL NVERVEAFVK RILQVCSHWL NVGTITGFFF LLIQLAKTVP 480
481 QIKNLLTNTP VDYEYESDAE EEQGDKDIKR KEYDGRKRDP KFANAEKSSL WEINNFINHF 540
541 HPTVKTYANA YVTGETEQIA KPDLGLFTLS HFLDRFVYRS AKQTNTARGT SIMQPLFSGS 600
601 RVNDSVLVKA SDIMHDQGPV NTEDWLTKKV EDIKPEDKFF YQYFTTKKTA DGKGKKSNKA 660
661 SNFDSDDEMD ENEIWSALVK SRPDVEDDSD DSELDFAEDD FSDSTSDDE
|
| Detection Method: | |
| Confidence: | 1000.0 |
| Match: | PF03914 |
| Description: | CBF/Mak21 family |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
| Term | Confidence | Notes |
| binding | 2.81296846555705 | bayes_pls_golite062009 |
| RNA binding | 2.62914297393378 | bayes_pls_golite062009 |
| structural molecule activity | 2.41912877876968 | bayes_pls_golite062009 |
| protein binding | 1.81870125631028 | bayes_pls_golite062009 |
| mRNA binding | 0.868658457661827 | bayes_pls_golite062009 |
| cytoskeletal protein binding | 0.19418057335311 | bayes_pls_golite062009 |
| nucleic acid binding | 0.118461769548431 | bayes_pls_golite062009 |
|
Region A: Residues: [923-1025] |
1 11 21 31 41 51
| | | | | |
1 PKLDAIDDED AKSEGSQESD QEEGLDEDIF YSFDGEQDNS DKKRSFAESS EEDESSEEEK 60
61 EEEENKEVSA KRAKKKQRKN MLKSLPVFAS ADDYAQYLDQ DSD
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
