| Protein: | PST1 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 444 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PST1.
| Description | E-value | Query Range |
Subject Range |
|
|
236.0 | [0..13] | [390..55] |
|
|
224.0 | [0..6] | [414..2] |
|
|
196.0 | [0..10] | [354..8] |
|
|
190.0 | [0..1] | [366..1] |
|
|
184.0 | [0..3] | [365..2] |
|
Region A: Residues: [1-126] |
1 11 21 31 41 51
| | | | | |
1 MQLHSLIAST ALLITSALAA TSSSSSIPSS CTISSHATAT AQSDLDKYSR CDTLVGNLTI 60
61 GGGLKTGALA NVKEINGSLT IFNATNLTSF AADSLESITD SLNLQSLTIL TSASFGSLQS 120
121 VDSIKL
|
| Detection Method: |  |
| Confidence: | 5.522879 |
| Match: | 1h6uA |
| Description: | Internalin H |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [127-363] |
1 11 21 31 41 51
| | | | | |
1 ITLPAISSFT SNIKSANNIY ISDTSLQSVD GFSALKKVNV FNVNNNKKLT SIKSPVETVS 60
61 DSLQFSFNGN QTKITFDDLV WANNISLTDV HSVSFANLQK INSSLGFINN SISSLNFTKL 120
121 NTIGQTFSIV SNDYLKNLSF SNLSTIGGAL VVANNTGLQK IGGLDNLTTI GGTLEVVGNF 180
181 TSLNLDSLKS VKGGADVESK SSNFSCNALK ALQKKGGIKG ESFVCKNGAS STSVKLS
|
| Detection Method: | |
| Confidence: | 19.30103 |
| Match: | 1g9uA |
| Description: | Leucine rich effector protein YopM |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [364-444] |
1 11 21 31 41 51
| | | | | |
1 STSKSQSSQT TAKVSKSSSK AEEKKFTSGD IKAAASASSV SSSGASSSSS KSSKGNAAIM 60
61 APIGQTTPLV GLLTAIIMSI M
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.691 | a.60.9 | lambda integrase-like, N-terminal domain |
| View | Download | 0.378 | d.54.1 | Enolase N-terminal domain-like |
| View | Download | 0.356 | a.130.1 | Chorismate mutase II |
| View | Download | 0.351 | a.24.13 | Domain of the SRP/SRP receptor G-proteins |
| View | Download | 0.332 | d.51.1 | Eukaryotic type KH-domain (KH-domain type I) |
| View | Download | 0.300 | d.201.1 | SRP19 |
| View | Download | 0.300 | d.201.1 | SRP19 |
| View | Download | 0.294 | d.58.17 | Metal-binding domain |
| View | Download | 0.286 | a.39.1 | EF-hand |
| View | Download | 0.230 | d.51.1 | Eukaryotic type KH-domain (KH-domain type I) |
