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View Structure Prediction Details

Protein: NRG1
Organism: Saccharomyces cerevisiae
Length: 231 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for NRG1.

Description E-value Query
Range
Subject
Range
ZSCAN20 - zinc finger and SCAN domain containing 20
0.0 [3..230] [651..947]

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Predicted Domain #1
Region A:
Residues: [1-127]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFYPYNYSNL NVSTMPALPG ISAFDGMQDE ENVEISPERK YQTLLPVLTN SHVVENELKH  60
   61 KLNKTAFDFR YQTKSENGSE KWEPKYLITP NLQTRSVSFD NSSVQYNSDS SEKSSLSQLT 120
  121 CNSSIIQ

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

    MCM
Score
GO
Score
GO
Term
SCOP
Match
SCOP Description
View Download 0.279 0.870 invasive growth in response to glucose limitation b.1.1 Immunoglobulin

Predicted Domain #2
Region A:
Residues: [128-231]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 QPENGIVSND AYNKMANSRY SLKTRKQRTD PRNTLSDEED LEQRRKYICK ICARGFTTSG  60
   61 HLARHNRIHT GEKNHCCPYK GCTQRFSRHD NCLQHYRTHL KKGQ

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 74.218487
Match: 1lu6A_
Description: No description for 1lu6A_ was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle