Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YDR018C.
| Description | E-value | Query Range |
Subject Range |
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4.0E-91 | [1..396] | [1..396] |
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5.0E-72 | [21..388] | [3..340] |
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3.0E-70 | [21..388] | [3..340] |
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1.0E-68 | [22..379] | [10..325] |
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6.0E-68 | [22..383] | [10..329] |
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3.0E-63 | [23..390] | [6..343] |
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2.0E-61 | [15..380] | [1..337] |
|
Region A: Residues: [1-102] |
1 11 21 31 41 51
| | | | | |
1 MKHSQKYRRY GIYEKTGNPF IKGLQRLLIA CLFISGSLSI VVFQICLQVL LPWSKIRFQN 60
61 GINQSKKAFI VLLCMILNMV APSSLNVTFE TSRPLKNSSN AK
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.911 | a.74.1 | Cyclin-like |
| View | Download | 0.822 | a.7.6 | Ribosomal protein S20 |
| View | Download | 0.801 | f.1.4 | Bcl-2 inhibitors of programmed cell death |
| View | Download | 0.765 | a.46.1 | Methionine synthase domain |
| View | Download | 0.761 | a.112.1 | Description not found. |
|
Region A: Residues: [103-247] |
1 11 21 31 41 51
| | | | | |
1 PCFRFKDRAI IIANHQMYAD WIYLWWLSFV SNLGGNVYII LKKALQYIPL LGFGMRNFKF 60
61 IFLSRNWQKD EKALTNSLVS MDLNARCKGP LTNYKSCYSK TNESIAAYNL IMFPEGTNLS 120
121 LKTREKSEAF CQRAHLDHVQ LRHLL
|
| Detection Method: | |
| Confidence: | 2.221849 |
| Match: | 1k30A_ |
| Description: | Glycerol-3-phosphate (1)-acyltransferase |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [248-396] |
1 11 21 31 41 51
| | | | | |
1 LPHSKGLKFA VEKLAPSLDA IYDVTIGYSP ALRTEYVGTK FTLKKIFLMG VYPEKVDFYI 60
61 REFRVNEIPL QDDEVFFNWL LGVWKEKDQL LEDYYNTGQF KSNAKNDNQS IVVTTQTTGF 120
121 QHETLTPRIL SYYGFFAFLI LVFVMKKNH
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.567 | 0.183 | phospholipid biosynthetic process | a.26.1 | 4-helical cytokines |
| View | Download | 0.538 | 0.040 | phospholipid biosynthetic process | a.27.1 | Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases |
| View | Download | 0.565 | 0.008 | phospholipid biosynthetic process | a.29.5 | alpha-ketoacid dehydrogenase kinase, N-terminal domain |
| View | Download | 0.515 | 0.004 | phospholipid biosynthetic process | a.60.10 | Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain |
| View | Download | 0.567 | N/A | N/A | a.26.1 | 4-helical cytokines |
| View | Download | 0.565 | N/A | N/A | a.29.5 | alpha-ketoacid dehydrogenase kinase, N-terminal domain |
| View | Download | 0.548 | N/A | N/A | a.26.1 | 4-helical cytokines |
| View | Download | 0.538 | N/A | N/A | a.27.1 | Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases |
| View | Download | 0.515 | N/A | N/A | a.60.10 | Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain |
| View | Download | 0.509 | N/A | N/A | a.25.1 | Ferritin-like |
| View | Download | 0.474 | N/A | N/A | a.26.1 | 4-helical cytokines |
| View | Download | 0.463 | N/A | N/A | a.7.1 | Spectrin repeat |
| View | Download | 0.459 | N/A | N/A | c.37.1 | P-loop containing nucleoside triphosphate hydrolases |
| View | Download | 0.456 | N/A | N/A | c.116.1 | alpha/beta knot |
| View | Download | 0.456 | N/A | N/A | a.73.1 | Retrovirus capsid protein, N-terminal core domain |
| View | Download | 0.427 | N/A | N/A | a.25.2 | Thermoplasma ferritin-like 4-helical bundle |
| View | Download | 0.414 | N/A | N/A | a.24.9 | alpha-catenin/vinculin |
| View | Download | 0.384 | N/A | N/A | a.25.1 | Ferritin-like |
| View | Download | 0.367 | N/A | N/A | a.7.1 | Spectrin repeat |
| View | Download | 0.365 | N/A | N/A | b.40.4 | Nucleic acid-binding proteins |
| View | Download | 0.363 | N/A | N/A | a.25.1 | Ferritin-like |
| View | Download | 0.358 | N/A | N/A | a.25.1 | Ferritin-like |
| View | Download | 0.357 | N/A | N/A | c.26.1 | Nucleotidylyl transferase |
| View | Download | 0.347 | N/A | N/A | c.26.2 | Adenine nucleotide alpha hydrolases-like |
| View | Download | 0.320 | N/A | N/A | a.25.1 | Ferritin-like |
| View | Download | 0.296 | N/A | N/A | d.81.1 | Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain |
| View | Download | 0.293 | N/A | N/A | d.87.2 | CO dehydrogenase flavoprotein C-terminal domain-like |
| View | Download | 0.290 | N/A | N/A | c.47.1 | Thioredoxin-like |
| View | Download | 0.277 | N/A | N/A | a.133.1 | Phospholipase A2, PLA2 |
| View | Download | 0.270 | N/A | N/A | a.45.1 | Glutathione S-transferase (GST), C-terminal domain |
| View | Download | 0.262 | N/A | N/A | c.98.2 | HPr kinase/phoshatase HprK N-terminal domain |
| View | Download | 0.255 | N/A | N/A | d.104.1 | Class II aaRS and biotin synthetases |
| View | Download | 0.252 | N/A | N/A | a.185.1 | Gametocyte protein Pfg27 |
| View | Download | 0.251 | N/A | N/A | a.24.4 | Hemerythrin |
| View | Download | 0.247 | N/A | N/A | d.110.2 | GAF domain-like |
| View | Download | 0.245 | N/A | N/A | c.3.1 | FAD/NAD(P)-binding domain |
| View | Download | 0.244 | N/A | N/A | c.37.1 | P-loop containing nucleoside triphosphate hydrolases |
| View | Download | 0.240 | N/A | N/A | c.3.1 | FAD/NAD(P)-binding domain |
| View | Download | 0.239 | N/A | N/A | i.11.1 | Computational models partly based on NMR data |
| View | Download | 0.234 | N/A | N/A | c.13.2 | Anti-sigma factor antagonist SpoIIaa |
| View | Download | 0.229 | N/A | N/A | c.51.4 | Maf/Ham1 |
| View | Download | 0.217 | N/A | N/A | a.2.7 | tRNA-binding arm |
| View | Download | 0.215 | N/A | N/A | d.122.1 | ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase |
| View | Download | 0.212 | N/A | N/A | a.24.9 | alpha-catenin/vinculin |
| View | Download | 0.208 | N/A | N/A | a.24.9 | alpha-catenin/vinculin |
