| Protein: | GCS1 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 352 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for GCS1.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..352] | [1..352] |
|
|
4.0E-80 | [8..352] | [4..332] |
|
|
3.0E-78 | [12..351] | [5..394] |
|
|
1.0E-75 | [8..352] | [4..332] |
|
|
2.0E-75 | [8..352] | [4..332] |
|
|
3.0E-73 | [8..350] | [4..352] |
|
|
6.0E-57 | [1..284] | [1..283] |
|
Region A: Residues: [1-201] |
1 11 21 31 41 51
| | | | | |
1 MSDWKVDPDT RRRLLQLQKI GANKKCMDCG APNPQWATPK FGAFICLECA GIHRGLGVHI 60
61 SFVRSITMDQ FKPEELLRME KGGNEPLTEW FKSHNIDLSL PQKVKYDNPV AEDYKEKLTC 120
121 LCEDRVFEER EHLDFDASKL SATSQTAASA TPGVAQSREG TPLENRRSAT PANSSNGANF 180
181 QKEKNEAYFA ELGKKNQSRP D
|
| Detection Method: |  |
| Confidence: | 187.221849 |
| Match: | 1dcqA_ |
| Description: | Pyk2-associated protein beta; Pyk2-associated protein beta ARF-GAP domain |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [202-254] |
1 11 21 31 41 51
| | | | | |
1 HLPPSQGGKY QGFGSTPAKP PQERSAGSSN TLSLENFQAD PLGTLSRGWG LFS
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [255-352] |
1 11 21 31 41 51
| | | | | |
1 SAVTKSFEDV NETVIKPHVQ QWQSGELSEE TKRAAAQFGQ KFQETSSYGF QAFSNFTKNF 60
61 NGNAEDSSTA GNTTHTEYQK IDNNDKKNEQ DEDKWDDF
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
