YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: YDL218W
Organism: Saccharomyces cerevisiae
Length: 317 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YDL218W.

Description E-value Query
Range
Subject
Range
YD218_YEAST - Uncharacterized membrane protein YDL218W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN...
YDL218W - Putative protein of unknown function; YDL218W transcription is regulated by Azf1p and induced by sta...
gi|151941789 - gi|151941789|gb|EDN60145.1| conserved protein [Saccharomyces cerevisiae YJM789]
gi|190405210 - gi|190405210|gb|EDV08477.1| conserved hypothetical protein [Saccharomyces cerevisiae RM11-1a]
0.0 [1..317] [1..317]

Back

Predicted Domain #1
Region A:
Residues: [1-205]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKRVTGVFLT LLRFSQFASS VLVMSLLAYA IHAYGNRGNK KTNFTLATGV ISVFYLIALG  60
   61 ILCLALPTLI YIGMYFCAEL IVCMLWLAAF VVLAKAQGER SCSNTNADGL YYNPYSGQYT 120
  121 ADSHRRACNS SQAAIAFSGL CFVLFLISVI LLGINVLTPI RKRYQTQGMW RSGASMGTKL 180
  181 HRWSGLALSE PFEETAAYDN TNVRT

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted functions:

Term Confidence Notes
binding 0.811519640840312 bayes_pls_golite062009
protein binding 0.289805917204192 bayes_pls_golite062009

Predicted Domain #2
Region A:
Residues: [206-317]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GDVEAGAGDN AAYTSEPNGD ARYATNDPNG QYHTTTTNTR YTTTTADPKT RYTTNDRNPG  60
   61 SANVANSAVD QHAYSTDESG DRSYQEKVTE GAHSGAMSGS TAEPNRNVNQ MP

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [285-317]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GDRSYQEKVT EGAHSGAMSG STAEPNRNVN QMP

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle