| Protein: | GLE1 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 538 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for GLE1.
| Description | E-value | Query Range |
Subject Range |
|
|
6.0E-75 | [1..538] | [1..538] |
|
|
3.0E-51 | [16..509] | [153..659] |
|
|
1.0E-50 | [16..509] | [151..658] |
|
|
6.0E-46 | [2..370] | [213..587] |
|
|
6.0E-46 | [2..370] | [1202..1576] |
|
|
1.0E-45 | [2..370] | [1196..1570] |
|
Region A: Residues: [1-317] |
1 11 21 31 41 51
| | | | | |
1 MRFVFDEVFN SDTDSPEFEE TCSTTSSTSS QCPTPEPSPA IKLPSFTKVG TKKLVNESVV 60
61 ILDPALENAL RDLNLQSKLI PINEPIVAAS SIIVPHSTNM PLPRASHSSL LDNAKNSNAT 120
121 APLLEAIEES FQRKMQNLVL ANQKEIQSIR ENKRRVEEQR KRKEEEERKR KEAEEKAKRE 180
181 QELLRQKKDE EERKRKEAEA KLAQQKQEEE RKKIEEQNEK ERQLKKEHEA KLLQQKDKLG 240
241 KAVTNFDKIS KMFWHYKDKI AQIKQDIVLP IKKADVNVRN LLSRHKRKIN PKFGQLTNSN 300
301 QQLFKIQNEL TQLINDT
|
| Detection Method: |  |
| Confidence: | 23.522879 |
| Match: | 1i84S_ |
| Description: | Heavy meromyosin subfragment |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [318-538] |
1 11 21 31 41 51
| | | | | |
1 KGDSLAYHWI LNFIAKAVVH QAETEVRVKP ESALPLGKLT LYLLVQFPEL QELFMARLVK 60
61 KCPFVIGFTC EIDTEKGRQN MGWKRNNENK WEDNTSYDER MGGILSLFAI ITRLQLPQEF 120
121 ITTTSHPFPI ALSWHILARI CNTPLNLITN THFVILGSWW DAAAVQFLQA YGNQASKLLI 180
181 LIGEELTSRM AEKKYVGAAR LRILLEAWQN NNMESFPEMS P
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [351-538] |
1 11 21 31 41 51
| | | | | |
1 LPLGKLTLYL LVQFPELQEL FMARLVKKCP FVIGFTCEID TEKGRQNMGW KRNNENKWED 60
61 NTSYDERMGG ILSLFAIITR LQLPQEFITT TSHPFPIALS WHILARICNT PLNLITNTHF 120
121 VILGSWWDAA AVQFLQAYGN QASKLLILIG EELTSRMAEK KYVGAARLRI LLEAWQNNNM 180
181 ESFPEMSP
|
| Detection Method: | |
| Confidence: | 55.39794 |
| Match: | PF07817.4 |
| Description: | No description for PF07817.4 was found. |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
