YRC Public Data Repository - Protein Structure Prediction

Protein:	YDL157C
Organism:	Saccharomyces cerevisiae
Length:	118 amino acids
Reference:	Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076

[What does the above image mean?]

[Show Ginzu Version Information]

Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YDL157C.

Description	E-value	Query Range	Subject Range
gi\|50289939, gi\|... - gi\|50289939\|ref\|XP_447401.1\| hypothetical protein CAGL0I03520g [Candida glabrata CBS138], gi\|4952671... gi\|49526711 - gi\|49526711\|emb\|CAG60338.1\| unnamed protein product [Candida glabrata]	167.0	[0..1]	[106..1]
gi\|49642073, gi\|... - gi\|50305959\|ref\|XP_452940.1\| unnamed protein product [Kluyveromyces lactis], gi\|49642073\|emb\|CAH0179... gi\|49642073 - gi\|49642073\|emb\|CAH01791.1\| KLLA0C16555p [Kluyveromyces lactis]	157.0	[0..2]	[104..3]
gi\|45185881, gi\|... - gi\|45185881\|ref\|NP_983597.1\| ACR195Wp [Ashbya gossypii ATCC 10895], gi\|44981671\|gb\|AAS51421.1\| ACR19... gi\|44981671 - gi\|44981671\|gb\|AAS51421.1\| ACR195Wp [Ashbya gossypii ATCC 10895]	150.0	[0..1]	[104..2]
gi\|50424799, gi\|... - gi\|50424799\|ref\|XP_460989.1\| hypothetical protein DEHA0F15675g [Debaryomyces hansenii CBS767], gi\|49...	69.0	[0..1]	[101..1]
gi\|49651563 - gi\|49651563\|emb\|CAG78502.1\| YALI0F21087p [Yarrowia lipolytica] gi\|50556570, gi\|... - gi\|50556570\|ref\|XP_505693.1\| YALI0F21087p [Yarrowia lipolytica], gi\|49651563\|emb\|CAG78502.1\| unnamed...	55.0	[0..2]	[87..5]
gi\|238879848 - gi\|238879848\|gb\|EEQ43486.1\| conserved hypothetical protein [Candida albicans WO-1] orf19.4358, orf1... - orf19.4358 CGDID:CAL0001047 Assembly 19, Contig19-10203 (23136, 23438) CDS, translated using codon t... gi\|68481890, gi\|... - gi\|68481890\|ref\|XP_715084.1\| hypothetical protein CaO19.11836 [Candida albicans SC5314], gi\|68481787...	52.0	[0..1]	[93..1]

Back

Predicted Domain #1

Region A:
Residues: [1-118]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSNILAVFNP PPQRELEKEE TMDCVPCQVM STMFSVGFGS YLASGKPFKY GKKEAKRGIS  60
   61 LTEFEKRNPQ WWKVTLRSFG GLLIAFGFVR GTEGWLWHKN KEYKNYKKLS NDGETQAN

[Run NCBI BLAST on this sequence.]

Detection Method:

deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits