YRC Public Data Repository - Protein Structure Prediction

Protein:	IWR1
Organism:	Saccharomyces cerevisiae
Length:	240 amino acids
Reference:	Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for IWR1.

Description	E-value	Query Range	Subject Range
fs(2)ltoPP43-PA - The gene female sterile (2) ltoPP43 is referred to in FlyBase by the symbol Dmel\fs(2)ltoPP43 (CG105...	0.006	[40..144]	[198..295]

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Predicted Domain #1

Region A:
Residues: [1-240]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVNDYLKLNK GVEKTERKKP SRKYFTGDSA KIASLPSLDY VFDIYHLEKI HDDEVARYNN  60
   61 EKNIGFVKII EHIDLALDEE SDPNEARSDD EDSNDENYYQ NDYPEDEDDD RSILFGSEGE 120
  121 DIAALGEEIV IGVNKSRFSS WNDDKIQGSN GYHDVEEEYG DLFNRLGGKS DVLKSINSSN 180
  181 FIDLDGQEGE IEISDNEDDS DEGDDIEYPR NEFFPTDVDD PLAHHRDRIF HQLQKKINRS 240
  241

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Detection Method:

deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2

Region A:
Residues: [167-240]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GGKSDVLKSI NSSNFIDLDG QEGEIEISDN EDDSDEGDDI EYPRNEFFPT DVDDPLAHHR  60
   61 DRIFHQLQKK INRS