| Protein: | BRE1 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 700 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for BRE1.
| Description | E-value | Query Range |
Subject Range |
|
|
6.0E-78 | [1..658] | [1048..1690] |
|
|
1.0E-76 | [1..658] | [1049..1691] |
|
|
2.0E-76 | [1..658] | [1050..1692] |
|
|
2.0E-76 | [1..658] | [1051..1693] |
|
|
2.0E-76 | [1..658] | [47..689] |
|
|
2.0E-76 | [1..658] | [1050..1692] |
|
Region A: Residues: [1-342] |
1 11 21 31 41 51
| | | | | |
1 MTAEPATKKI KLELSDPSEP LTQSDVIAFQ KEALFRCINR RRVDFEALRK QYELSRRECI 60
61 DVSRKLANIM ALIVTLARFI ETFCTDANEK QLCREIAQGD ETLIVQRSDS FMKLLTKYGK 120
121 PNTTDSNTNS NASDHIQELT TELKNLRKSK EELFYENSQL TEEISALKEY YTNIIRKYDR 180
181 DESFTIKRVF KEDKTDAVKE LREDEKESNE NNIKSGNKDS SAINGDNTSK KSEKGDELVQ 240
241 AEDERKEDAE NEKLELDLKF SDLRAEINSL SSTIKDLENI RRENEEELIK TRSEVSNLKK 300
301 QQIAAADQDP DFKSYDHESL LAKIQHLTEQ NAELSEINSS FL
|
| Detection Method: |  |
| Confidence: | 21.522879 |
| Match: | 1i84S_ |
| Description: | Heavy meromyosin subfragment |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [343-400] |
1 11 21 31 41 51
| | | | | |
1 SKFQVLAKEK EIYTKKVREE FQKSLDSLVE MNSSLEKDVV RIRTARDDLL SKIAILEA
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [401-470] |
1 11 21 31 41 51
| | | | | |
1 EKSKTEVLSD LQHAIDILKE QWTKIDQRSN DTKSSSTQDA LIKEIQDLEK GFRELSDLTH 60
61 KKYSEIINHE
|
| Detection Method: | |
| Confidence: | 9.522879 |
| Match: | 1c1gA_ |
| Description: | Tropomyosin |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [471-700] |
1 11 21 31 41 51
| | | | | |
1 SVISKLTVEK TKADQKYFAA MRSKDSILIE IKTLSKSLSK SNELILQLKD SDRLLQQKIG 60
61 NLHKQLDLSQ NNERRLIDSS KTETLKIIDL NNTSTKLKRS LEKLQEESNK SIADMTHLET 120
121 KLNDTEIELK HFKQKASHLE SKCEKLHDTL FRGNNKNKGS SDEALVEELA NFRTLVYCSL 180
181 CSKNWKNMAI KTCGHVFCEN CCKERLAARM RKCPTCNKAF SSNDLLTVHL
|
| Detection Method: | |
| Confidence: | 9.522879 |
| Match: | 1c1gA_ |
| Description: | Tropomyosin |
| Matching Structure (courtesy of the PDB): |
|
