| Protein: | BDF2 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 638 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for BDF2.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..622] | [1..622] |
|
|
2.0E-88 | [109..638] | [3..475] |
|
|
6.0E-88 | [5..629] | [78..687] |
|
|
6.0E-82 | [108..627] | [1..617] |
|
|
5.0E-81 | [56..635] | [1..554] |
|
Region A: Residues: [1-121] |
1 11 21 31 41 51
| | | | | |
1 MSRTNMDTRH AHSALLAAPQ SATANSRSSN SSSESSSNKN NINVGVGDDS GNVSAVSIDD 60
61 GPHFRDIFHY GHEENYKLAS SGITNLNSSS HAHQTLSPIS ISNASTPESF PEHPLGLERE 120
121 T
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [122-242] |
1 11 21 31 41 51
| | | | | |
1 EPALEAEMEA EELPPHQSKY LLSSIKATKR LKDARPFLKP VDPIALNIPH YFNYVQTPMD 60
61 LSLIETKLQG NVYHSVEQVT SDFKTMVDNC LNFNGPESSI SSMAKRIQKY FEKKLSAMPP 120
121 R
|
| Detection Method: | |
| Confidence: | 29.552842 |
| Match: | PF00439 |
| Description: | Bromodomain |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [243-315] |
1 11 21 31 41 51
| | | | | |
1 VLPASALKKT SRNRKKNEDM DSPLVIRRSV STTNDNIGES GNREGVSGGR PKRTIHPPKS 60
61 KDLFDIYENS KPK
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.219 | 0.888 | nucleus | a.4.1 | Homeodomain-like |
|
Region A: Residues: [316-445] |
1 11 21 31 41 51
| | | | | |
1 SKTLQKKFRT CLKILKVLMS KKNSDINFPF LQPVDPIALN LPNYFDVVKN PMDLGTISNN 60
61 LMNWKYKTID QFVDDLNLVF YNCFQFNPEG NEVHSMGKKL KELFNFHWLE NQDILNEIET 120
121 DSDLEEDNYS
|
| Detection Method: | |
| Confidence: | 131.533179 |
| Match: | 1e6iA_ |
| Description: | GCN5 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [446-502] |
1 11 21 31 41 51
| | | | | |
1 SSYSSDDEYD DEDINENDIT NPAIQYLEQK LKKMEVELQQ LKRQELSKLS KERKRKH
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.807 | 0.002 | nucleus | a.8.1 | Bacterial immunoglobulin/albumin-binding domains |
|
Region A: Residues: [503-638] |
1 11 21 31 41 51
| | | | | |
1 LGKTLLRRKA MKHSVDDLKK SITDKINELS DLEMNGMIRI IKNSLPADEI LTSNEDEIEI 60
61 DLDILDEATI ARIYERYFEK KNNNNSKRKL SGNYSTAPTN KKKKTLKFLE KDEIINNNNY 120
121 SDSEEDSSDS SDSDSD
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
