Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YDL025C.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..620] | [1..620] |
|
|
0.0 | [200..620] | [9..433] |
|
|
0.0 | [200..620] | [9..430] |
|
|
0.0 | [208..620] | [17..433] |
|
|
0.0 | [200..620] | [9..426] |
|
|
0.0 | [252..620] | [23..389] |
|
Region A: Residues: [1-88] |
1 11 21 31 41 51
| | | | | |
1 MVKETPLHSS SSTSLSSLFR PTKLKNLSAK IFNGGGNQSY SKTDDVSRSS SRSSKKNTDS 60
61 DQEDQIKYNK PNDRRSTIGK SPQGNGAL
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [89-168] |
1 11 21 31 41 51
| | | | | |
1 SKESHVVASS TLTGISPTSA KKAPIDYSPS RPLPNNHNPV RTGHTVPHLP HSIHNPINYI 60
61 HQGSKDAFHH PHPVRSTAHS
|
| Detection Method: | |
| Confidence: | 8.69897 |
| Match: | 1f3mA_ |
| Description: | pak1 autoregulatory domain |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [169-274] |
1 11 21 31 41 51
| | | | | |
1 NISTVSSAKS DTPSSNLSYQ AHMHPVEILQ KQIEDKHFMD SQASTPGSVE LQHNSSSGSD 60
61 DTSSRKKKSL RLTRFFKKIH NDYHDNHHHH HHHNRGSTPT KPKLNL
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [275-356] |
1 11 21 31 41 51
| | | | | |
1 NTNENIVESN GKALYETDNP VELLEKYGIP GRKLGEGASG SVSVVERTDG KLFACKMFRK 60
61 PHLNNEGTNQ SQLANYSKKV TT
|
|
Region B: Residues: [373-387] |
1 11 21 31 41 51
| | | | | |
1 LDMLTEGDTY LLVME
|
| Detection Method: | |
| Confidence: | 342.70927 |
| Match: | 1ia8A_ |
| Description: | Cell cycle checkpoint kinase chk1 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [357-372] |
1 11 21 31 41 51
| | | | | |
1 EFCIGSTLHH ENIVET
|
|
Region B: Residues: [388-396] |
1 11 21 31 41 51
| | | | | |
1 YAPYDFFNL
|
|
Region C: Residues: [411-464] |
1 11 21 31 41 51
| | | | | |
1 FKQLCHGVNY LHSMGLAHRD LKLDNCVVTK DGILKLIDFG SAVVFQYPYE DTIV
|
| Detection Method: | |
| Confidence: | 342.70927 |
| Match: | 1ia8A_ |
| Description: | Cell cycle checkpoint kinase chk1 |
| Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [397-410] |
1 11 21 31 41 51
| | | | | |
1 VMSNLMTQDE VNCY
|
|
Region B: Residues: [465-620] |
1 11 21 31 41 51
| | | | | |
1 KSHGIVGSDP YLAPELLKQT SYDPRVADVW SIAIIFYCMV LKRFPWKAPK KSFNSFRLFT 60
61 EEPEDEDDIV RGPNKILRLL PRHSRTIIGR MLALEPKQRV LMNDVVKDDW LVSVPSCEVD 120
121 PTSGDLVEKP KNHKHHLVTE EELNELTKQH GNKDSN
|
| Detection Method: | |
| Confidence: | 342.70927 |
| Match: | 1ia8A_ |
| Description: | Cell cycle checkpoint kinase chk1 |
| Matching Structure (courtesy of the PDB): |
|
