| Protein: | TSC13 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 310 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for TSC13.
| Description | E-value | Query Range |
Subject Range |
|
|
7.0E-85 | [1..310] | [1..310] |
|
|
5.0E-83 | [5..309] | [5..303] |
|
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8.0E-83 | [5..309] | [9..307] |
|
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9.0E-82 | [6..309] | [10..307] |
|
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3.0E-74 | [7..309] | [11..301] |
|
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5.0E-74 | [1..309] | [1..310] |
|
Region A: Residues: [1-116] |
1 11 21 31 41 51
| | | | | |
1 MPITIKSRSK GLRDTEIDLS KKPTLDDVLK KISANNHNIS KYRIRLTYKK ESKQVPVISE 60
61 SFFQEEADDS MEFFIKDLGP QISWRLVFFC EYLGPVLVHS LFYYLSTIPT VVDRWH
|
| Detection Method: |  |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.417 | 0.086 | endoplasmic reticulum membrane | b.6.1 | Cupredoxins |
| View | Download | 0.414 | 0.083 | endoplasmic reticulum membrane | b.60.1 | Lipocalins |
| View | Download | 0.644 | 0.035 | endoplasmic reticulum membrane | d.218.1 | Nucleotidyltransferase |
| View | Download | 0.574 | 0.031 | endoplasmic reticulum membrane | c.30.1 | PreATP-grasp domain |
| View | Download | 0.442 | 0.011 | mitochondrion | c.23.4 | Succinyl-CoA synthetase domains |
| View | Download | 0.409 | N/A | N/A | a.45.1 | Glutathione S-transferase (GST), C-terminal domain |
| View | Download | 0.391 | N/A | N/A | c.55.1 | Actin-like ATPase domain |
| View | Download | 0.383 | N/A | N/A | a.118.8 | TPR-like |
| View | Download | 0.381 | N/A | N/A | c.59.1 | MurD-like peptide ligases, peptide-binding domain |
| View | Download | 0.364 | N/A | N/A | d.79.1 | YjgF-like |
| View | Download | 0.337 | N/A | N/A | c.13.2 | Anti-sigma factor antagonist SpoIIaa |
| View | Download | 0.310 | N/A | N/A | d.109.1 | Actin depolymerizing proteins |
| View | Download | 0.304 | N/A | N/A | c.61.1 | PRTase-like |
| View | Download | 0.304 | N/A | N/A | d.122.1 | ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase |
| View | Download | 0.283 | N/A | N/A | c.97.1 | Cytidine deaminase-like |
| View | Download | 0.281 | N/A | N/A | a.118.1 | ARM repeat |
| View | Download | 0.281 | N/A | N/A | d.95.2 | Homing endonucleases |
| View | Download | 0.278 | N/A | N/A | d.42.1 | POZ domain |
| View | Download | 0.275 | N/A | N/A | b.60.1 | Lipocalins |
| View | Download | 0.270 | N/A | N/A | d.15.2 | CAD & PB1 domains |
| View | Download | 0.253 | N/A | N/A | c.32.1 | Tubulin/Dihydroxyacetone kinase nucleotide-binding domain |
| View | Download | 0.241 | N/A | N/A | d.15.1 | Ubiquitin-like |
| View | Download | 0.232 | N/A | N/A | b.1.1 | Immunoglobulin |
| View | Download | 0.227 | N/A | N/A | d.113.1 | Nudix |
| View | Download | 0.225 | N/A | N/A | b.60.1 | Lipocalins |
| View | Download | 0.221 | N/A | N/A | d.58.2 | Aspartate carbamoyltransferase, Regulatory-chain, N-terminal domain |
| View | Download | 0.216 | N/A | N/A | d.73.1 | RuBisCO, small subunit |
| View | Download | 0.212 | N/A | N/A | c.2.1 | NAD(P)-binding Rossmann-fold domains |
| View | Download | 0.210 | N/A | N/A | d.68.4 | YhbY-like |
| View | Download | 0.206 | N/A | N/A | d.118.1 | N-acetylmuramoyl-L-alanine amidase-like |
| View | Download | 0.203 | N/A | N/A | c.2.1 | NAD(P)-binding Rossmann-fold domains |
|
Region A: Residues: [117-310] |
1 11 21 31 41 51
| | | | | |
1 SASSDYNPFL NRVAYFLILG HYGKRLFETL FVHQFSLATM PIFNLFKNCF HYWVLSGLIS 60
61 FGYFGYGFPF GNAKLFKYYS YLKLDDLSTL IGLFVLSELW NFYCHIKLRL WGDYQKKHGN 120
121 AKIRVPLNQG IFNLFVAPNY TFEVWSWIWF TFVFKFNLFA VLFLTVSTAQ MYAWAQKKNK 180
181 KYHTRRAFLI PFVF
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| Detection Method: | |
| Confidence: | 73.148742 |
| Match: | PF02544 |
| Description: | 3-oxo-5-alpha-steroid 4-dehydrogenase |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
