| Protein: | CDC39 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 2108 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CDC39.
| Description | E-value | Query Range |
Subject Range |
|
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0.0 | [1..2108] | [1..2108] |
|
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0.0 | [1..2108] | [1..2108] |
|
|
0.0 | [556..2078] | [625..2075] |
|
|
0.0 | [1451..1952] | [20..557] |
|
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0.0 | [543..910] | [406..845] |
|
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0.0 | [1353..1762] | [920..1275] |
|
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1.0E-91 | [728..1270] | [901..1454] |
|
Region A: Residues: [1-527] |
1 11 21 31 41 51
| | | | | |
1 MLSATYRDLN TASNLETSKE KQAAQIVIAQ ISLLFTTLNN DNFESVEREI RHILDRSSVD 60
61 IYIKVWERLL TLSSRDILQA GKFLLQENLL HRLLLEFAKD LPKKSTDLIE LLKERTFNNQ 120
121 EFQKQTGITL SLFIDLFDKS ANKDIIESLD RSSQINDFKT IKMNHTNYLR NFFLQTTPET 180
181 LESNLRDLLH SLEGESLNDL LALLLSEILS PGSQNLQNDP TRSWLTPPMV LDATNRGNVI 240
241 ARSISSLQAN QINWNRVFNL MSTKYFLSAP LMPTTASLSC LFAALHDGPV IDEFFSCDWK 300
301 VIFKLDLAIQ LHKWSVQNGC FDLLNAEGTR KVSETIPNTK QSLLYLLSIA SLNLELFLQR 360
361 EELSDGPMLA YFQECFFEDF NYAPEYLILA LVKEMKRFVL LIENRTVIDE ILITLLIQVH 420
421 NKSPSSFKDV ISTITDDSKI VDAAKIIINS DDAPIANFLK SLLDTGRLDT VINKLPFNEA 480
481 FKILPCARQI GWEGFDTFLK TKVSPSNVDV VLESLEVQTK MTDTNTP
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [528-754] |
1 11 21 31 41 51
| | | | | |
1 FRSLKTFDLF AFHSLIEVLN KCPLDVLQLQ RFESLEFSLL IAFPRLINFG FGHDEAILAN 60
61 GDIAGINNDI EKEMQNYLQK MYSGELAIKD VIELLRRLRD SDLPRDQEVF TCITHAVIAE 120
121 STFFQDYPLD ALATTSVLFG SMILFQLLRG FVLDVAFRII MRFAKEPPES KMFKFAVQAI 180
181 YAFRIRLAEY PQYCKDLLRD VPALKSQAQV YQSIVEAATL ANAPKER
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [755-880] |
1 11 21 31 41 51
| | | | | |
1 SRPVQEMIPL KFFAVDEVSC QINQEGAPKD VVEKVLFVLN NVTLANLNNK VDELKKSLTP 60
61 NYFSWFSTYL VTQRAKTEPN YHDLYSKVIV AMGSGLLHQF MVNVTLRQLF VLLSTKDEQA 120
121 IDKKHL
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.695 | a.74.1 | Cyclin-like |
| View | Download | 0.557 | a.29.2 | Bromodomain |
| View | Download | 0.508 | a.118.9 | ENTH/VHS domain |
| View | Download | 0.520 | d.54.1 | Enolase N-terminal domain-like |
| View | Download | 0.500 | a.74.1 | Cyclin-like |
| View | Download | 0.489 | d.54.1 | Enolase N-terminal domain-like |
| View | Download | 0.459 | a.4.6 | C-terminal effector domain of the bipartite response regulators |
| View | Download | 0.454 | d.55.1 | Ribosomal protein L22 |
| View | Download | 0.429 | a.23.4 | Mitochondrial import receptor subunit Tom20 |
| View | Download | 0.425 | a.77.1 | DEATH domain |
| View | Download | 0.417 | a.81.1 | N-terminal domain of DnaB helicase |
| View | Download | 0.411 | a.77.1 | DEATH domain |
| View | Download | 0.410 | a.80.1 | DNA polymerase III clamp loader subunits, C-terminal domain |
| View | Download | 0.401 | d.54.1 | Enolase N-terminal domain-like |
| View | Download | 0.384 | a.24.10 | Histidine-containing phosphotransfer domain, HPT domain |
| View | Download | 0.379 | a.118.11 | Cytochrome c oxidase subunit E |
| View | Download | 0.371 | a.54.1 | Domain of early E2A DNA-binding protein, ADDBP |
| View | Download | 0.357 | c.45.1 | (Phosphotyrosine protein) phosphatases II |
| View | Download | 0.352 | a.118.9 | ENTH/VHS domain |
| View | Download | 0.348 | d.54.1 | Enolase N-terminal domain-like |
| View | Download | 0.337 | c.55.1 | Actin-like ATPase domain |
| View | Download | 0.330 | a.7.2 | Enzyme IIa from lactose specific PTS, IIa-lac |
| View | Download | 0.322 | d.58.39 | Glutamyl tRNA-reductase catalytic, N-terminal domain |
| View | Download | 0.305 | a.85.1 | Hemocyanin, N-terminal domain |
| View | Download | 0.301 | a.24.11 | Bacterial GAP domain |
| View | Download | 0.301 | a.118.9 | ENTH/VHS domain |
| View | Download | 0.298 | a.60.9 | lambda integrase-like, N-terminal domain |
| View | Download | 0.297 | a.118.8 | TPR-like |
| View | Download | 0.296 | a.52.1 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin |
| View | Download | 0.296 | a.27.1 | Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases |
| View | Download | 0.294 | c.58.1 | Aminoacid dehydrogenase-like, N-terminal domain |
| View | Download | 0.293 | f.1.4 | Bcl-2 inhibitors of programmed cell death |
| View | Download | 0.290 | a.133.1 | Phospholipase A2, PLA2 |
| View | Download | 0.285 | c.55.4 | Translational machinery components |
| View | Download | 0.281 | a.118.8 | TPR-like |
| View | Download | 0.276 | a.45.1 | Glutathione S-transferase (GST), C-terminal domain |
| View | Download | 0.275 | c.2.1 | NAD(P)-binding Rossmann-fold domains |
| View | Download | 0.272 | a.60.9 | lambda integrase-like, N-terminal domain |
| View | Download | 0.270 | a.46.1 | Methionine synthase domain |
| View | Download | 0.256 | d.224.1 | SufE-like |
| View | Download | 0.245 | a.118.8 | TPR-like |
| View | Download | 0.243 | f.36.1 | Neurotransmitter-gated ion-channel pransmembrane pore |
| View | Download | 0.239 | a.56.1 | CO dehydrogenase ISP C-domain like |
| View | Download | 0.237 | d.58.33 | Formylmethanofuran:tetrahydromethanopterin formyltransferase |
| View | Download | 0.226 | c.45.1 | (Phosphotyrosine protein) phosphatases II |
| View | Download | 0.223 | a.118.1 | ARM repeat |
| View | Download | 0.221 | a.29.2 | Bromodomain |
| View | Download | 0.219 | a.45.1 | Glutathione S-transferase (GST), C-terminal domain |
| View | Download | 0.217 | a.52.1 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin |
| View | Download | 0.214 | d.54.1 | Enolase N-terminal domain-like |
| View | Download | 0.214 | a.45.1 | Glutathione S-transferase (GST), C-terminal domain |
| View | Download | 0.213 | a.56.1 | CO dehydrogenase ISP C-domain like |
| View | Download | 0.213 | d.168.1 | Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain |
| View | Download | 0.202 | b.34.9 | Tudor/PWWP/MBT |
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Region A: Residues: [881-1076] |
1 11 21 31 41 51
| | | | | |
1 KNLASWLGCI TLALNKPIKH KNIAFREMLI EAYKENRLEI VVPFVTKILQ RASESKIFKP 60
61 PNPWTVGILK LLIELNEKAN WKLSLTFEVE VLLKSFNLTT KSLKPSNFIN TPEVIETLSG 120
121 ALGSITLEQQ QTEQQRQIIL MQQHQQQMLI YQQRQQQQQQ RQQQQQHHIS ANTIADQQAA 180
181 FGGEGSISHD NPFNNL
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [1077-1351] |
1 11 21 31 41 51
| | | | | |
1 LGSTIFVTHP DLKRVFQMAL AKSVREILLE VVEKSSGIAV VTTTKIILKD FATEVDESKL 60
61 KTAAIIMVRH LAQSLARATS IEPLKEGIRS TMQSLAPNLM SLSSSPAEEL DTAINENIGI 120
121 ALVLIEKASM DKSTQDLADQ LMQAIAIRRY HKERRADQPF ITQNTNPYSL SLPEPLGLKN 180
181 TGVTPQQFRV YEEFGKNIPN LDVIPFAGLP AHAPPMTQNV GLTQPQQQQA QMPTQILTSE 240
241 QIRAQQQQQQ LQKSRLNQPS QSAQPPGVNV PNPQG
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.695 | a.74.1 | Cyclin-like |
| View | Download | 0.557 | a.29.2 | Bromodomain |
| View | Download | 0.555 | a.74.1 | Cyclin-like |
| View | Download | 0.547 | a.29.2 | Bromodomain |
| View | Download | 0.539 | d.54.1 | Enolase N-terminal domain-like |
|
Region A: Residues: [1352-1772] |
1 11 21 31 41 51
| | | | | |
1 GIAAVQSDLE QNQRVLVHLM DILVSQIKEN ATKNNLAELG DQNQIKTIIF QILTFIAKSA 60
61 QKDQLALKVS QAVVNSLFAT SESPLCREVL SLLLEKLCSL SLVARKDVVW WLVYALDSRK 120
121 FNVPVIRSLL EVNLIDATEL DNVLVTAMKN KMENSTEFAM KLIQNTVLSD DPILMRMDFI 180
181 KTLEHLASSE DENVKKFIKE FEDTKIMPVR KGTKTTRTEK LYLVFTEWVK LLQRVENNDV 240
241 ITTVFIKQLV EKGVISDTDN LLTFVKSSLE LSVSSFKESD PTDEVFIAID ALGSLIIKLL 300
301 ILQGFKDDTR RDYINAIFSV IVLVFAKDHS QEGTTFNERP YFRLFSNILY EWATIRTHNF 360
361 VRISDSSTRQ ELIEFDSVFY NTFSGYLHAL QPFAFPGFSF AWVTLLSHRM LLPIMLRLPN 420
421 K
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [1773-2108] |
1 11 21 31 41 51
| | | | | |
1 IGWEKLMLLI IDLFKFLDQY TSKHAVSDAV SVVYKGTLRV ILGISNDMPS FLIENHYELM 60
61 NNLPPTYFQL KNVILSAIPK NMTVPNPYDV DLNMEDIPAC KELPEVFFDP VIDLHSLKKP 120
121 VDNYLRIPSN SLLRTILSAI YKDTYDIKKG VGYDFLSVDS KLIRAIVLHV GIEAGIEYKR 180
181 TSSNAVFNTK SSYYTLLFNL IQNGSIEMKY QIILSIVEQL RYPNIHTYWF SFVLMNMFKS 240
241 DEWNDQKLEV QEIILRNFLK RIIVNKPHTW GVSVFFTQLI NNNDINLLDL PFVQSVPEIK 300
301 LILQQLVKYS KKYTTSEQDD QSATINRRQT PLQSNA
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [1079-1286] |
1 11 21 31 41 51
| | | | | |
1 STIFVTHPDL KRVFQMALAK SVREILLEVV EKSSGIAVVT TTKIILKDFA TEVDESKLKT 60
61 AAIIMVRHLA QSLARATSIE PLKEGIRSTM QSLAPNLMSL SSSPAEELDT AINENIGIAL 120
121 VLIEKASMDK STQDLADQLM QAIAIRRYHK ERRADQPFIT QNTNPYSLSL PEPLGLKNTG 180
181 VTPQQFRVYE EFGKNIPNLD VIPFAGLP
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [1287-1382] |
1 11 21 31 41 51
| | | | | |
1 AHAPPMTQNV GLTQPQQQQA QMPTQILTSE QIRAQQQQQQ LQKSRLNQPS QSAQPPGVNV 60
61 PNPQGGIAAV QSDLEQNQRV LVHLMDILVS QIKENA
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [1383-1457] |
1 11 21 31 41 51
| | | | | |
1 TKNNLAELGD QNQIKTIIFQ ILTFIAKSAQ KDQLALKVSQ AVVNSLFATS ESPLCREVLS 60
61 LLLEKLCSLS LVARK
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [1458-1522] |
1 11 21 31 41 51
| | | | | |
1 DVVWWLVYAL DSRKFNVPVI RSLLEVNLID ATELDNVLVT AMKNKMENST EFAMKLIQNT 60
61 VLSDD
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [1523-1709] |
1 11 21 31 41 51
| | | | | |
1 PILMRMDFIK TLEHLASSED ENVKKFIKEF EDTKIMPVRK GTKTTRTEKL YLVFTEWVKL 60
61 LQRVENNDVI TTVFIKQLVE KGVISDTDNL LTFVKSSLEL SVSSFKESDP TDEVFIAIDA 120
121 LGSLIIKLLI LQGFKDDTRR DYINAIFSVI VLVFAKDHSQ EGTTFNERPY FRLFSNILYE 180
181 WATIRTH
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [1710-1862] |
1 11 21 31 41 51
| | | | | |
1 NFVRISDSST RQELIEFDSV FYNTFSGYLH ALQPFAFPGF SFAWVTLLSH RMLLPIMLRL 60
61 PNKIGWEKLM LLIIDLFKFL DQYTSKHAVS DAVSVVYKGT LRVILGISND MPSFLIENHY 120
121 ELMNNLPPTY FQLKNVILSA IPKNMTVPNP YDV
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [1863-2108] |
1 11 21 31 41 51
| | | | | |
1 DLNMEDIPAC KELPEVFFDP VIDLHSLKKP VDNYLRIPSN SLLRTILSAI YKDTYDIKKG 60
61 VGYDFLSVDS KLIRAIVLHV GIEAGIEYKR TSSNAVFNTK SSYYTLLFNL IQNGSIEMKY 120
121 QIILSIVEQL RYPNIHTYWF SFVLMNMFKS DEWNDQKLEV QEIILRNFLK RIIVNKPHTW 180
181 GVSVFFTQLI NNNDINLLDL PFVQSVPEIK LILQQLVKYS KKYTTSEQDD QSATINRRQT 240
241 PLQSNA
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
