| Protein: | PAT1 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 796 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PAT1.
| Description | E-value | Query Range |
Subject Range |
|
|
518.0 | [0..143] | [796..197] |
|
|
486.0 | [0..1] | [788..1] |
|
|
472.0 | [0..1] | [796..1] |
|
|
456.0 | [0..44] | [678..236] |
|
|
456.0 | [0..1] | [796..1] |
|
|
365.0 | [0..109] | [649..170] |
|
|
361.0 | [0..161] | [661..301] |
|
Region A: Residues: [1-227] |
1 11 21 31 41 51
| | | | | |
1 MSFFGLENSG NARDGPLDFE ESYKGYGEHE LEENDYLNDE TFGDNVQVGT DFDFGNPHSS 60
61 GSSGNAIGGN GVGATARSYV AATAEGISGP RTDGTAAAGP LDLKPMESLW STAPPPAMAP 120
121 SPQSTMAPAP APQQMAPLQP ILSMQDLERQ QRQMQQQFMN FHAMGHPQGL PQGPPQQQFP 180
181 MQPASGQPGP SQFAPPPPPP GVNVNMNQMP MGPVQVPVQA SPSPIGM
|
| Detection Method: |  |
| Confidence: | 12.04 |
| Match: | |
| Description: | No description for 1deqA was found. |
|
Region A: Residues: [228-424] |
1 11 21 31 41 51
| | | | | |
1 SNTPSPGPVV GATKMPLQSG RRSKRDLSPE EQRRLQIRHA KVEKILKYSG LMTPRDKDFI 60
61 TRYQLSQIVT EDPYNEDFYF QVYKIIQRGG ITSESNKGLI ARAYLEHSGH RLGGRYKRTD 120
121 IALQRMQSQV EKAVTVAKER PSKLKDQQAA AGNSSQDNKQ ANTVLGKISS TLNSKNPRRQ 180
181 LQIPRQQPSD PDALKDV
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.565 | N/A | N/A | a.118.8 | TPR-like |
| View | Download | 0.442 | N/A | N/A | a.118.8 | TPR-like |
| View | Download | 0.281 | N/A | N/A | a.118.8 | TPR-like |
| View | Download | 0.281 | N/A | N/A | a.118.8 | TPR-like |
| View | Download | 0.278 | N/A | N/A | d.2.1 | Lysozyme-like |
| View | Download | 0.272 | N/A | N/A | a.118.8 | TPR-like |
| View | Download | 0.233 | N/A | N/A | a.118.3 | Sec7 domain |
|
Region A: Residues: [425-796] |
1 11 21 31 41 51
| | | | | |
1 TDSLTNVDLA SSGSSSTGSS AAAVASKQRR RSSYAFNNGN GATNLNKSGG KKFILELIET 60
61 VYEEILDLEA NLRNGQQTDS TAMWEALHID DSSYDVNPFI SMLSFDKGIK IMPRIFNFLD 120
121 KQQKLKILQK IFNELSHLQI IILSSYKTTP KPTLTQLKKV DLFQMIILKI IVSFLSNNSN 180
181 FIEIMGLLLQ LIRNNNVSFL TTSKIGLNLI TILISRAALI KQDSSRSNIL SSPEISTWNE 240
241 IYDKLFTSLE SKIQLIFPPR EYNVHIMRLQ NDKFMDEAYI WQFLASLALS GKLNHQRIII 300
301 DEVRDEIFAT INEAETLQKK EKELSVLPQR SQELDTELKS IIYNKEKLYQ DLNLFLNVMG 360
361 LVYRDGEISE LK
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
