| Protein: | RSA4 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 515 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for RSA4.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [2..514] | [961..1480] |
|
|
0.0 | [28..513] | [807..1278] |
|
Region A: Residues: [1-111] |
1 11 21 31 41 51
| | | | | |
1 MSTLIPPPSK KQKKEAQLPR EVAIIPKDLP NVSIKFQALD TGDNVGGALR VPGAISEKQL 60
61 EELLNQLNGT SDDPVPYTFS CTIQGKKASD PVKTIDITDN LYSSLIKPGY N
|
| Detection Method: |  |
| Confidence: | 105.228787 |
| Match: | 1gxrA_ |
| Description: | Groucho/tle1, C-terminal domain |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [112-430] |
1 11 21 31 41 51
| | | | | |
1 STEDQITLLY TPRAVFKVKP VTRSSSAIAG HGSTILCSAF APHTSSRMVT GAGDNTARIW 60
61 DCDTQTPMHT LKGHYNWVLC VSWSPDGEVI ATGSMDNTIR LWDPKSGQCL GDALRGHSKW 120
121 ITSLSWEPIH LVKPGSKPRL ASSSKDGTIK IWDTVSRVCQ YTMSGHTNSV SCVKWGGQGL 180
181 LYSGSHDRTV RVWDINSQGR CINILKSHAH WVNHLSLSTD YALRIGAFDH TGKKPSTPEE 240
241 AQKKALENYE KICKKNGNSE EMMVTASDDY TMFLWNPLKS TKPIARMTGH QKLVNHVAFS 300
301 PDGRYIVSAS FDNSIKLWD
|
| Detection Method: | |
| Confidence: | 223.917458 |
| Match: | 1gg2B_ |
| Description: | beta1-subunit of the signal-transducing G protein heterotrimer |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [431-515] |
1 11 21 31 41 51
| | | | | |
1 GRDGKFISTF RGHVASVYQV AWSSDCRLLV SCSKDTTLKV WDVRTRKLSV DLPGHKDEVY 60
61 TVDWSVDGKR VCSGGKDKMV RLWTH
|
| Detection Method: | |
| Confidence: | 237.457575 |
| Match: | 1erjA_ |
| Description: | Tup1, C-terminal domain |
Matching Structure (courtesy of the PDB): |
|
