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View Structure Prediction Details

Protein: TAH1
Organism: Saccharomyces cerevisiae
Length: 111 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for TAH1.

Description E-value Query
Range
Subject
Range
TOC64_PEA - Translocon at the outer membrane of chloroplasts 64 OS=Pisum sativum GN=TOC64 PE=1 SV=1
9.0E-32 [2..107] [475..581]
gi|16930441, gi|... - gi|33589766|gb|AAQ22649.1| At2g42810/F7D19.19 [Arabidopsis thaliana], gi|20197966|gb|AAD21727.2| put...
1.0E-31 [1..107] [10..117]
SGTB_MOUSE - Small glutamine-rich tetratricopeptide repeat-containing protein beta OS=Mus musculus GN=Sgtb PE=1 S...
8.0E-30 [3..104] [84..186]
gi|7507776 - gi|7507776|pir||T16867 probable cytochrome P450 T13C5.1 [similarity] - Caenorhabditis elegans
1.0E-29 [2..104] [125..228]
SGTA_RAT - Small glutamine-rich tetratricopeptide repeat-containing protein alpha OS=Rattus norvegicus GN=Sgta ...
2.0E-29 [2..104] [89..192]

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Predicted Domain #1
Region A:
Residues: [1-111]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSQFEKQKEQ GNSLFKQGLY REAVHCYDQL ITAQPQNPVG YSNKAMALIK LGEYTQAIQM  60
   61 CQQGLRYTST AEHVAIRSKL QYRLELAQGA VGSVQIPVVE VDELPEGYDR S

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 71.09691
Match: 1elwA_
Description: Hop
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
binding 2.12690485191789 bayes_pls_golite062009
protein binding 1.37826414185164 bayes_pls_golite062009
transcription regulator activity 1.26149030245805 bayes_pls_golite062009
heat shock protein binding 1.23450221149054 bayes_pls_golite062009
nucleic acid binding 1.12329561215614 bayes_pls_golite062009
unfolded protein binding 1.03065657981002 bayes_pls_golite062009
DNA binding 0.9531600253493 bayes_pls_golite062009
ligase activity 0.825764637499128 bayes_pls_golite062009
transcription factor activity 0.374364600772076 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle