| Protein: | PER1 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 357 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PER1.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..357] | [1..357] |
|
|
0.0 | [5..350] | [8..333] |
|
|
2.0E-85 | [6..350] | [12..315] |
|
|
6.0E-75 | [5..344] | [6..301] |
|
|
6.0E-48 | [100..343] | [51..268] |
|
Region A: Residues: [1-98] |
1 11 21 31 41 51
| | | | | |
1 MRLAVVVTLL VHCFLVTCSP GDNLDEFIDC TYACEYNRRC PNSQINYIDP ETNMFHDIEF 60
61 FDTPPLYSKL LFWDCISDCD YQCQHIITRW RIDEEEEI
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.595 | 0.970 | cellular manganese ion homeostasis | a.4.5 | "Winged helix" DNA-binding domain |
|
Region A: Residues: [99-357] |
1 11 21 31 41 51
| | | | | |
1 YQFHGKWPFL RVLGTQEFFS TIFSIGNFIP HYKGFVKFSR IIREEGDRRR KNSRSILIWN 60
61 YLYVTVAGML AWTASSVFHC RDLIITEKLD YFFAGLTVLT GFHAIFARMT SMFLYPKIAQ 120
121 AFTASVAAIF ALHILRLYVD WSYTYNMRFN IFFGVLQYIL LIMLSCQNYH ALQKQKLMGE 180
181 FKKTAYSSFK RQIFKLCVIP ILLVIVTTMA MSLELFDFFS YEWQIDAHAL WHLCTIWPSW 240
241 VLYDFFLEDY AYWGNRQLY
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
