| Protein: | SNT1 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 1226 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SNT1.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..1226] | [1..1226] |
|
|
5.0E-77 | [623..963] | [26..385] |
|
|
6.0E-75 | [516..943] | [743..1162] |
|
|
6.0E-74 | [579..962] | [3..401] |
|
|
1.0E-65 | [228..958] | [14..677] |
|
Region A: Residues: [1-551] |
1 11 21 31 41 51
| | | | | |
1 MGYPPPTRRL GDKKRYHYSN NPNRRHPSAV YSKNSFPKSS NNGFVSSPTA DNSTNPSVTP 60
61 STASVPLPTA APGSTFGIEA PRPSRYDPSS VSRPSSSSYS STRKIGSRYN PDVERSSSTT 120
121 SSTPESMNTS TITHTNTDIG NSRYSRKTMS RYNPQSTSST NVTHFPSALS NAPPFYVANG 180
181 SSRRPRSMDD YSPDVTNKLE TNNVSSVNNN SPHSYYSRSN KWRSIGTPSR PPFDNHVGNM 240
241 TTTSNTNSIH QREPFWKANS TTILKSTHSQ SSPSLHTKKF HDANKLDKPE ASVKVETPSK 300
301 DETKAISYHD NNFPPRKSVS KPNAPLEPDN IKVGEEDALG KKEVHKSGRE IAKEHPTPVK 360
361 MKEHDELEAR AKKVSKINID GKQDEIWTTA KTVASAVEVS KESQKELTRS VERKESPEIR 420
421 DYERAYDPKA LKTDVTKLTV DNDNKSYEEP LEKVEGCIFP LPKAETRLWE LKNQKRNKII 480
481 SEQKYLLKKA IRNFSEYPFY AQNKLIHQQA TGLILTKIIS KIKKEEHLKK INLKHDYFDL 540
541 QKKYEKECEI L
|
| Detection Method: |  |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [552-656] |
1 11 21 31 41 51
| | | | | |
1 TKLSENLRKE EIENKRKEHE LMEQKRREEG IETEKEKSLR HPSSSSSSRR RNRADFVDDA 60
61 EMENVLLQID PNYKHYQAAA TIPPLILDPI RKHSYKFCDV NNLVT
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.364 | a.24.4 | Hemerythrin |
| View | Download | 0.221 | c.53.1 | Resolvase-like |
| View | Download | 0.243 | a.71.1 | Endoplasmic reticulum protein ERP29, C-domain |
|
Region A: Residues: [657-779] |
1 11 21 31 41 51
| | | | | |
1 DKKLWASRIL KDASDNFTDH EHSLFLEGYL IHPKKFGKIS HYMGGLRSPE ECVLHYYRTK 60
61 KTVNYKQLLI DKNKKRKMSA AAKRRKRKER SNDEEVEVDE SKEESTNTIE KEEKSENNAE 120
121 ENV
|
| Detection Method: | |
| Confidence: | 11.119186 |
| Match: | PF00249 |
| Description: | Myb-like DNA-binding domain |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [780-875] |
1 11 21 31 41 51
| | | | | |
1 QPVLVQGSEV KGDPLGTPEK VENMIEQRGE EFAGELENAE RVNDLKRAHD EVGEESNKSS 60
61 VIETNNGVQI MDPKGAVQNG YYPEETKELD FSLENA
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.546 | b.55.1 | PH domain-like |
| View | Download | 0.412 | a.24.13 | Domain of the SRP/SRP receptor G-proteins |
| View | Download | 0.392 | a.60.6 | DNA polymerase beta, N-terminal domain-like |
| View | Download | 0.442 | a.60.13 | Putative methyltransferase TM0872, insert domain |
| View | Download | 0.402 | a.24.13 | Domain of the SRP/SRP receptor G-proteins |
| View | Download | 0.338 | a.21.1 | HMG-box |
| View | Download | 0.334 | d.49.1 | Signal recognition particle alu RNA binding heterodimer, SRP9/14 |
| View | Download | 0.328 | a.24.15 | FAD-dependent thiol oxidase |
| View | Download | 0.315 | b.6.1 | Cupredoxins |
| View | Download | 0.315 | a.2.3 | Chaperone J-domain |
| View | Download | 0.311 | a.7.7 | BAG domain |
| View | Download | 0.294 | a.24.17 | Group V grass pollen allergen |
| View | Download | 0.293 | a.70.1 | N-terminal domain of the delta subunit of the F1F0-ATP synthase |
| View | Download | 0.291 | a.27.1 | Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases |
| View | Download | 0.287 | c.47.1 | Thioredoxin-like |
| View | Download | 0.272 | c.47.1 | Thioredoxin-like |
| View | Download | 0.256 | a.80.1 | DNA polymerase III clamp loader subunits, C-terminal domain |
| View | Download | 0.255 | a.7.8 | GAT domain |
| View | Download | 0.248 | a.23.5 | Hemolysin expression modulating protein HHA |
| View | Download | 0.230 | a.24.11 | Bacterial GAP domain |
| View | Download | 0.227 | c.51.1 | Anticodon-binding domain of Class II aaRS |
| View | Download | 0.209 | b.48.1 | mu transposase, C-terminal domain |
|
Region A: Residues: [876-968] |
1 11 21 31 41 51
| | | | | |
1 LQRKKHKSAP EHKTSYWSVR ESQLFPELLK EFGSQWSLIS EKLGTKSTTM VRNYYQRNAA 60
61 RNGWKLLVDE TDLKRDGTSS ESVQQSQILI QPE
|
| Detection Method: | |
| Confidence: | 10.49485 |
| Match: | PF00249 |
| Description: | Myb-like DNA-binding domain |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [969-1226] |
1 11 21 31 41 51
| | | | | |
1 RPNINAYSNI PPQQRPALGY FVGQPTHGHN TSISSIDGSI RPFGPDFHRD TFSKISAPLT 60
61 TLPPPRLPSI QFPRSEMAEP TVTDLRNRPL DHIDTLADAA SSVTNNQNFS NERNAIDIGR 120
121 KSTTISNLLN NSDRSMKSSF QSASRHEAQL EDTPSMNNIV VQEIKPNITT PRSSSISALL 180
181 NPVNGNGQSN PDGRPLLPFQ HAISQGTPTF PLPAPRTSPI SRAPPKFNFS NDPLAALAAV 240
241 ASAPDAMSSF LSKKENNN
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [831-965] |
1 11 21 31 41 51
| | | | | |
1 VGEESNKSSV IETNNGVQIM DPKGAVQNGY YPEETKELDF SLENALQRKK HKSAPEHKTS 60
61 YWSVRESQLF PELLKEFGSQ WSLISEKLGT KSTTMVRNYY QRNAARNGWK LLVDETDLKR 120
121 DGTSSESVQQ SQILI
|
| Detection Method: | |
| Confidence: | 38.69897 |
| Match: | 2iw5B |
| Description: | No description for 2iw5B was found. |
|
Region A: Residues: [966-1226] |
1 11 21 31 41 51
| | | | | |
1 QPERPNINAY SNIPPQQRPA LGYFVGQPTH GHNTSISSID GSIRPFGPDF HRDTFSKISA 60
61 PLTTLPPPRL PSIQFPRSEM AEPTVTDLRN RPLDHIDTLA DAASSVTNNQ NFSNERNAID 120
121 IGRKSTTISN LLNNSDRSMK SSFQSASRHE AQLEDTPSMN NIVVQEIKPN ITTPRSSSIS 180
181 ALLNPVNGNG QSNPDGRPLL PFQHAISQGT PTFPLPAPRT SPISRAPPKF NFSNDPLAAL 240
241 AAVASAPDAM SSFLSKKENN N
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
