| Protein: | SAT4 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 603 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SAT4.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..603] | [1..603] |
|
|
0.0 | [152..598] | [33..452] |
|
|
0.0 | [160..599] | [2..420] |
|
|
0.0 | [312..595] | [15..276] |
|
|
0.0 | [312..591] | [16..273] |
|
|
0.0 | [191..590] | [296..672] |
|
Region A: Residues: [1-226] |
1 11 21 31 41 51
| | | | | |
1 MTGMNDNNAA IPQQTPRKHA LSSKVMQLFR SGSRSSRQGK ASSNIQPPSN INTNVPSASK 60
61 SAKFGLHTPT TATPRVVSNP SNTAGVSKPG MYMPEYYQSA SPSHSSSSAS LNNHIDINTS 120
121 KSSSAASLTS SVSALSLSPT SAINISSKSL SPKFSHHSNS NTAITPAPTP TASNINNVNK 180
181 ITNTSAPICG RFLVHKDGTH EHHLKNAKRQ EKLSTMIKNM VGASKL
|
| Detection Method: |  |
| Confidence: | 14.21 |
| Match: | 1i3qA |
| Description: | RBP1 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [227-279] |
1 11 21 31 41 51
| | | | | |
1 RGEAKSAVPD IIMDPKTTLK SNKNPPTLFA GFMKQVVDMD DKYPEGAPTS GAL
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.456 | a.157.1 | Skp1 dimerisation domain-like |
| View | Download | 0.522 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.632 | a.16.1 | S15/NS1 RNA-binding domain |
| View | Download | 0.450 | a.30.1 | ROP protein |
| View | Download | 0.422 | a.4.1 | Homeodomain-like |
| View | Download | 0.413 | a.32.1 | Transcription factor IIA (TFIIA), alpha-helical domain |
| View | Download | 0.396 | a.108.1 | Ribosomal protein L7/12, oligomerisation (N-terminal) domain |
| View | Download | 0.375 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.368 | a.8.1 | Bacterial immunoglobulin/albumin-binding domains |
| View | Download | 0.310 | a.4.6 | C-terminal effector domain of the bipartite response regulators |
| View | Download | 0.305 | a.4.1 | Homeodomain-like |
| View | Download | 0.279 | a.2.7 | tRNA-binding arm |
| View | Download | 0.259 | a.3.1 | Cytochrome c |
| View | Download | 0.257 | f.13.1 | Family A G protein-coupled receptor-like |
| View | Download | 0.245 | a.4.1 | Homeodomain-like |
| View | Download | 0.236 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.235 | a.30.2 | Homodimeric domain of signal transducing histidine kinase |
| View | Download | 0.225 | a.159.1 | Protein serine/threonine phosphatase 2C, C-terminal domain |
| View | Download | 0.223 | d.76.1 | GYF domain |
| View | Download | 0.210 | a.24.13 | Domain of the SRP/SRP receptor G-proteins |
|
Region A: Residues: [280-372] |
1 11 21 31 41 51
| | | | | |
1 NCPERDIYRS DQKDSKNNTH NITTTKKDRQ CFAEKYGRCQ EVLGKGAFGV VRICQKKNVS 60
61 SQDGNKSEKL YAVKEFKRRT SESAEKYSKR LTS
|
|
Region B: Residues: [389-404] |
1 11 21 31 41 51
| | | | | |
1 LDLFQDAKGE YCEVME
|
| Detection Method: | |
| Confidence: | 397.67837 |
| Match: | 1ia8A_ |
| Description: | Cell cycle checkpoint kinase chk1 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [373-388] |
1 11 21 31 41 51
| | | | | |
1 EFCISSSLHH TNIVTT
|
|
Region B: Residues: [405-414] |
1 11 21 31 41 51
| | | | | |
1 YCAGGDLFTL
|
|
Region C: Residues: [430-482] |
1 11 21 31 41 51
| | | | | |
1 FKQLIRGVVY MHEMGVCHRD LKPENLLLTH DGVLKITDFG NSECFKMAWE KNI
|
| Detection Method: | |
| Confidence: | 397.67837 |
| Match: | 1ia8A_ |
| Description: | Cell cycle checkpoint kinase chk1 |
| Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [415-429] |
1 11 21 31 41 51
| | | | | |
1 VVAAGKLEYM EADCF
|
|
Region B: Residues: [483-603] |
1 11 21 31 41 51
| | | | | |
1 HLSGGVCGSS PYIAPEEYIK EEFDPRPVDI WACGVIYMAM RTGRQLWSSA EKDDPFYMNY 60
61 LKGRKEKGGY EPIESLKRAR CRNVIYSMLD PVPYRRINGK QILNSEWGRE IKCCHNGRAL 120
121 K
|
| Detection Method: | |
| Confidence: | 397.67837 |
| Match: | 1ia8A_ |
| Description: | Cell cycle checkpoint kinase chk1 |
| Matching Structure (courtesy of the PDB): |
|
