| Protein: | CHA1 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 360 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CHA1.
| Description | E-value | Query Range |
Subject Range |
|
|
3.0E-88 | [5..349] | [84..410] |
|
|
3.0E-88 | [5..349] | [81..406] |
|
|
4.0E-88 | [5..349] | [81..406] |
|
|
1.0E-87 | [5..349] | [81..406] |
|
Region A: Residues: [1-30] |
1 11 21 31 41 51
| | | | | |
1 MSIVYNKTPL LRQFFPGKAS AQFFLKYECL
|
|
Region B: Residues: [152-360] |
1 11 21 31 41 51
| | | | | |
1 HSSMIDEIVQ DLKSQHISVN KVKGIVCSVG GGGLYNGIIQ GLERYGLADR IPIVGVETNG 60
61 CHVFNTSLKI GQPVQFKKIT SIATSLGTAV ISNQTFEYAR KYNTRSVVIE DKDVIETCLK 120
121 YTHQFNMVIE PACGAALHLG YNTKILENAL GSKLAADDIV IIIACGGSSN TIKDLEEALD 180
181 SMRKKDTPVI EVADNFIFPE KNIVNLKSA
|
| Detection Method: |  |
| Confidence: | 201.502279 |
| Match: | 1tdj__ |
| Description: | Allosteric threonine deaminase N-terminal domain; Allosteric threonine deaminase C-terminal domain |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| threonine synthase activity | 3.59927532963055 | bayes_pls_golite062009 |
| cysteine synthase activity | 2.82422444336531 | bayes_pls_golite062009 |
| catalytic activity | 2.38994231321972 | bayes_pls_golite062009 |
| lyase activity | 1.87743897464083 | bayes_pls_golite062009 |
| tryptophan synthase activity | 1.15770474211356 | bayes_pls_golite062009 |
| carbon-oxygen lyase activity | 0.923824749425553 | bayes_pls_golite062009 |
| ammonia-lyase activity | 0.476674617721478 | bayes_pls_golite062009 |
| L-threonine ammonia-lyase activity | 0.37325071016009 | bayes_pls_golite062009 |
| carbon-nitrogen lyase activity | 0.249761226675912 | bayes_pls_golite062009 |
|
Region A: Residues: [31-151] |
1 11 21 31 41 51
| | | | | |
1 QPSGSFKSRG IGNLIMKSAI RIQKDGKRSP QVFASSGGNA GFAAATACQR LSLPCTVVVP 60
61 TATKKRMVDK IRNTGAQVIV SGAYWKEADT FLKTNVMNKI DSQVIEPIYV HPFDNPDIWE 120
121 G
|
| Detection Method: | |
| Confidence: | 201.502279 |
| Match: | 1tdj__ |
| Description: | Allosteric threonine deaminase N-terminal domain; Allosteric threonine deaminase C-terminal domain |
| Matching Structure (courtesy of the PDB): |
|
