| Protein: | PBN1 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 416 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PBN1.
| Description | E-value | Query Range |
Subject Range |
|
|
291.0 | [0..4] | [416..5] |
|
|
258.0 | [0..4] | [404..15] |
|
|
253.0 | [0..6] | [399..55] |
|
|
242.0 | [0..222] | [377..132] |
|
|
119.0 | [0..154] | [403..174] |
|
|
107.0 | [0..164] | [403..195] |
|
|
100.0 | [0..224] | [405..269] |
|
|
99.0 | [0..148] | [403..121] |
|
Region A: Residues: [1-174] |
1 11 21 31 41 51
| | | | | |
1 MVTRHRVTVL YNAPEDIGNH MRQNDTHLTV RGGSGVVLQQ RWLLERTGSL DKSFTRITWR 60
61 PRADLARSLS VIENELSAGF SVYSNSSDVP ERFITNPVYN SFHSEKFDIE QYLPPEVDLN 120
121 LSWNPEDFTY DISVEPTQIQ IVEYRLLKQG EEFTIARVKD EKLEVGVFFV DASD
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.593 | c.37.1 | P-loop containing nucleoside triphosphate hydrolases |
| View | Download | 0.526 | b.60.1 | Lipocalins |
| View | Download | 0.526 | b.60.1 | Lipocalins |
| View | Download | 0.523 | b.60.1 | Lipocalins |
| View | Download | 0.506 | b.60.1 | Lipocalins |
| View | Download | 0.459 | b.125.1 | Lipoprotein localization factors LolAB |
| View | Download | 0.244 | d.67.1 | Threonyl-tRNA synthetase (ThrRS), second 'additional' domain |
|
Region A: Residues: [175-416] |
1 11 21 31 41 51
| | | | | |
1 ESDVDIGGIR CNWRMDDGKM ERCQKTSLLY KQGHIAYNHS TTTTSLYLNE PIGLHPKIMI 60
61 DLTDFEERPK CMYLMHLQLP LELFIDKFQS SPLLLFGEDD LELPEYSLRD KAWGSESIFE 120
121 LKAGTMNEVT LHTRYIEPSN NKGDKLEVSF DPEVILACDT GDNKVSRNPF YKKGLGYESL 180
181 FTDDTTFRHL NSTTLLVPIP RPDTKDYSKI KNGTLLCLLI SIIYIFSKVF GNNKKKRSVK 240
241 RE
|
| Detection Method: | |
| Confidence: | 101.920819 |
| Match: | PF08320.3 |
| Description: | No description for PF08320.3 was found. |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
