| Protein: | PDI1 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 522 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PDI1.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..522] | [1..522] |
|
|
0.0 | [8..497] | [1..488] |
|
|
0.0 | [1..493] | [1..493] |
|
|
0.0 | [8..522] | [1..515] |
|
|
0.0 | [15..496] | [14..491] |
|
|
0.0 | [12..496] | [11..491] |
|
Region A: Residues: [1-142] |
1 11 21 31 41 51
| | | | | |
1 MKFSAGAVLS WSSLLLASSV FAQQEAVAPE DSAVVKLATD SFNEYIQSHD LVLAEFFAPW 60
61 CGHCKNMAPE YVKAAETLVE KNITLAQIDC TENQDLCMEH NIPGFPSLKI FKNSDVNNSI 120
121 DYEGPRTAEA IVQFMIKQSQ PA
|
| Detection Method: |  |
| Confidence: | 239.67837 |
| Match: | 1mek__ |
| Description: | Protein disulfide isomerase, PDI |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [143-309] |
1 11 21 31 41 51
| | | | | |
1 VAVVADLPAY LANETFVTPV IVQSGKIDAD FNATFYSMAN KHFNDYDFVS AENADDDFKL 60
61 SIYLPSAMDE PVVYNGKKAD IADADVFEKW LQVEALPYFG EIDGSVFAQY VESGLPLGYL 120
121 FYNDEEELEE YKPLFTELAK KNRGLMNFVS IDARKFGRHA GNLNMKE
|
| Detection Method: | |
| Confidence: | 9.0 |
| Match: | 1bjx__ |
| Description: | Protein disulfide isomerase, PDI |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [310-370] |
1 11 21 31 41 51
| | | | | |
1 QFPLFAIHDM TEDLKYGLPQ LSEEAFDELS DKIVLESKAI ESLVKDFLKG DASPIVKSQE 60
61 I
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [371-522] |
1 11 21 31 41 51
| | | | | |
1 FENQDSSVFQ LVGKNHDEIV NDPKKDVLVL YYAPWCGHCK RLAPTYQELA DTYANATSDV 60
61 LIAKLDHTEN DVRGVVIEGY PTIVLYPGGK KSESVVYQGS RSLDSLFDFI KENGHFDVDG 120
121 KALYEEAQEK AAEEADADAE LADEEDAIHD EL
|
| Detection Method: | |
| Confidence: | 94.67837 |
| Match: | 1t7pB_ |
| Description: | Thioredoxin |
Matching Structure (courtesy of the PDB): |
|
