| Protein: | AGP1 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 595 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for AGP1.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..593] | [1..593] |
|
|
0.0 | [21..587] | [13..563] |
|
|
0.0 | [33..590] | [6..539] |
|
|
0.0 | [21..587] | [13..563] |
|
Region A: Residues: [1-87] |
1 11 21 31 41 51
| | | | | |
1 MSSSKSLYEL KDLKNSSTEI HATGQDNEIE YFETGSNDRP SSQPHLGYEQ HNTSAVRRFF 60
61 DSFKRADQGP QDEVEATQMN DLTSAIS
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
| Term | Confidence | Notes |
| binding | 2.16072293434243 | bayes_pls_golite062009 |
| cytoskeletal protein binding | 1.56123529621268 | bayes_pls_golite062009 |
| protein binding | 1.36724461365736 | bayes_pls_golite062009 |
| tubulin binding | 1.27811933320559 | bayes_pls_golite062009 |
| signal transducer activity | 0.941563416769786 | bayes_pls_golite062009 |
| molecular transducer activity | 0.941563416769786 | bayes_pls_golite062009 |
| microtubule binding | 0.433976380647151 | bayes_pls_golite062009 |
|
Region A: Residues: [88-595] |
1 11 21 31 41 51
| | | | | |
1 PSSRQAQELE KNESSDNIGA NTGHKSDSLK KTIQPRHVLM IALGTGIGTG LLVGNGTALV 60
61 HAGPAGLLIG YAIMGSILYC IIQACGEMAL VYSNLTGGYN AYPSFLVDDG FGFAVAWVYC 120
121 LQWLCVCPLE LVTASMTIKY WTTSVNPDVF VIIFYVLVIT INIFGARGYA EAEFFFNCCK 180
181 ILMMTGFFIL GIIIDVGGAG NDGFIGGKYW HDPGAFNGKH AIDRFKGVAA TLVTAAFAFG 240
241 GSEFIAITTA EQSNPRKAIP GAAKQMIYRI LFLFLATIIL LGFLVPYNSD QLLGSTGGGT 300
301 KASPYVIAVA SHGVRVVPHF INAVILLSVL SMANSSFYSS ARLFLTLSEQ GYAPKVFSYI 360
361 DRAGRPLIAM GVSALFAVIA FCAASPKEEQ VFTWLLAISG LSQLFTWTAI CLSHLRFRRA 420
421 MKVQGRSLGE LGFKSQTGVW GSAYACIMMI LILIAQFWVA IAPIGEGKLD AQAFFENYLA 480
481 MPILIALYVG YKVWHKDWKL FIRETRST
|
| Detection Method: | |
| Confidence: | 202.769551 |
| Match: | PF00324 |
| Description: | Amino acid permease |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
