| Protein: | PGS1 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 521 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PGS1.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..521] | [1..521] |
|
|
0.0 | [1..521] | [1..521] |
|
|
0.0 | [30..507] | [1..482] |
|
|
0.0 | [51..520] | [41..512] |
|
|
0.0 | [51..520] | [81..552] |
|
|
1.0E-88 | [51..520] | [49..493] |
|
|
1.0E-87 | [45..521] | [9..534] |
|
Region A: Residues: [1-68] |
1 11 21 31 41 51
| | | | | |
1 MTTRLLQLTR PHYRLLSLPL QKPFNIKRQM SAANPSPFGN YLNTITKSLQ QNLQTCFHFQ 60
61 AKEIDIIE
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [69-521] |
1 11 21 31 41 51
| | | | | |
1 SPSQFYDLLK TKILNSQNRI FIASLYLGKS ETELVDCISQ ALTKNPKLKV SFLLDGLRGT 60
61 RELPSACSAT LLSSLVAKYG SERVDCRLYK TPAYHGWKKV LVPKRFNEGL GLQHMKIYGF 120
121 DNEVILSGAN LSNDYFTNRQ DRYYLFKSRN FSNYYFKLHQ LISSFSYQII KPMVDGSINI 180
181 IWPDSNPTVE PTKNKRLFLR EASQLLDGFL KSSKQSLPIT AVGQFSTLVY PISQFTPLFP 240
241 KYNDKSTEKR TILSLLSTIT SNAISWTFTA GYFNILPDIK AKLLATPVAE ANVITASPFA 300
301 NGFYQSKGVS SNLPGAYLYL SKKFLQDVCR YRQDHAITLR EWQRGVVNKP NGWSYHAKGI 360
361 WLSARDKNDA NNWKPFITVI GSSNYTRRAY SLDLESNALI ITRDEELRKK MKAELDNLLQ 420
421 YTKPVTLEDF QSDPERHVGT GVKIATSILG KKL
|
| Detection Method: | |
| Confidence: | 9.221849 |
| Match: | 1f0iA_ |
| Description: | Phospholipase D |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 1.42274246180183 | bayes_pls_golite062009 |
| catalytic activity | 1.29236214516383 | bayes_pls_golite062009 |
| phosphoric diester hydrolase activity | 1.25148072945538 | bayes_pls_golite062009 |
| phosphoric ester hydrolase activity | 0.97354820978871 | bayes_pls_golite062009 |
| nucleic acid binding | 0.566950403258922 | bayes_pls_golite062009 |
| protein binding | 0.438178121330569 | bayes_pls_golite062009 |
| transferase activity | 0.417847571627092 | bayes_pls_golite062009 |
| kinase activity | 0.41582825017763 | bayes_pls_golite062009 |
| DNA binding | 0.402372477477629 | bayes_pls_golite062009 |
| transferase activity, transferring phosphorus-containing groups | 0.398900256450913 | bayes_pls_golite062009 |
