| Protein: | RIF1 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 1916 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for RIF1.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..1096] | [1..1096] |
|
Region A: Residues: [1-1127] |
1 11 21 31 41 51
| | | | | |
1 MSKDFSDKKK HTIDRIDQHI LRRSQHDNYS NGSSPWMKTN LPPPSPQAHM HIQSDLSPTP 60
61 KRRKLASSSD CENKQFDLSA INKNLYPEDT GSRLMQSLPE LSASNSDNVS PVTKSVAFSD 120
121 RIESSPIYRI PGSSPKPSPS SKPGKSILRN RLPSVRTVSD LSYNKLQYTQ HKLHNGNIFT 180
181 SPYKETRVNP RALEYWVSGE IHGLVDNESV SEFKEIIEGG LGILRQESED YVARRFEVYA 240
241 TFNNIIPILT TKNVNEVDQK FNILIVNIES IIEICIPHLQ IAQDTLLSSS EKKNPFVIRL 300
301 YVQIVRFFSA IMSNFKIVKW LTKRPDLVNK LKVIYRWTTG ALRNENSNKI IITAQVSFLR 360
361 DEKFGTFFLS NEEIKPIIST FTEIMEINSH NLIYEKLLLI RGFLSKYPKL MIETVTSWLP 420
421 GEVLPRIIIG DEIYSMKILI TSIVVLLELL KKCLDFVDEH ERIYQCIMLS PVCETIPEKF 480
481 LSKLPLNSYD SANLDKVTIG HLLTQQIKNY IVVKNDNKIA MDLWLSMTGL LYDSGKRVYD 540
541 LTSESNKVWF DLNNLCFINN HPKTRLMSIK VWRIITYCIC TKISQKNQEG NKSLLSLLRT 600
601 PFQMTLPYVN DPSAREGIIY HLLGVVYTAF TSNKNLSTDM FELFWDHLIT PIYEDYVFKY 660
661 DSIHLQNVLF TVLHLLIGGK NADVALERKY KKHIHPMSVI ASEGVKLKDI SSLPPQIIKR 720
721 EYDKIMKVVF QTVEVAISNV NLAHDLILTS LKHLPEDRKD QTHLESFSSL ILKVTQNNKD 780
781 TPIFRDFFGA VTSSFVYTFL DLFLRKNDSS LVNFNIQISK VGISQGNMTL DLLKDVIRKA 840
841 RNETSEFLII EKFLELDDKK TEVYAQNWVG STLLPPNISF REFQSLANIV NKVPNENSIE 900
901 NFLDLCLKLS FPVNLFTLLH VSMWSNNNFI YFIQSYVSKN ENKLNVDLIT LLKTSLPGNP 960
961 ELFSGLLPFL RRNKFMDILE YCIHSNPNLL NSIPDLNSDL LLKLLPRSRA SYFAANIKLF1020
1021 KCSEQLTLVR WLLKGQQLEQ LNQNFSEIEN VLQNASDSEL EKSEIIRELL HLAMANPIEP1080
1081 LFSGLLNFCI KNNMADHLDE FCGNMTSEVL FKISPELLLK LLTYKEK
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [1128-1916] |
1 11 21 31 41 51
| | | | | |
1 PNGKLLAAVI EKIENGDDDY ILELLEKIII QKEIQILEKL KEPLLVFFLN PVSSNMQKHK 60
61 KSTNMLRELV LLYLTKPLSR SAAKKFFSML ISILPPNPNY QTIDMVNLLI DLIKSHNRKF 120
121 KDKRTYNATL KTIGKWIQES GVVHQGDSSK EIEAIPDTKS MYIPCEGSEN KLSNLQRKVD 180
181 SQDIQVPATQ GMKEPPSSIQ ISSQISAKDS DSISLKNTAI MNSSQQESHA NRSRSIDDET 240
241 LEEVDNESIR EIDQQMKSTQ LDKNVANHSN ICSTKSDEVD VTELHESIDT QSSEVNAYQP 300
301 IEVLTSELKA VTNRSIKTNP DHNVVNSDNP LKRPSKETPT SENKRSKGHE TMVDVLVSEE 360
361 QAVSPSSDVI CTNIKSIANE ESSLALRNSI KVETNCNENS LNVTLDLDQQ TITKEDGKGQ 420
421 VEHVQRQENQ ESMNKINSKS FTQDNIAQYK SVKKARPNNE GENNDYACNV EQASPVRNEV 480
481 PGDGIQIPSG TILLNSSKQT EKSKVDDLRS DEDEHGTVAQ EKHQVGAINS RNKNNDRMDS 540
541 TPIQGTEEES REVVMTEEGI NVRLEDSGTC ELNKNLKGPL KGDKDANIND DFVPVEENVR 600
601 DEGFLKSMEH AVSKETGLEE QPEVADISVL PEIRIPIFNS LKMQGSKSQI KEKLKKRLQR 660
661 NELMPPDSPP RMTENTNINA QNGLDTVPKT IGGKEKHHEI QLGQAHTEAD GEPLLGGDGN 720
721 EDATSREATP SLKVHFFSKK SRRLVARLRG FTPGDLNGIS VEERRNLRIE LLDFMMRLEY 780
781 YSNRDNDMN
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [291-486] |
1 11 21 31 41 51
| | | | | |
1 EKKNPFVIRL YVQIVRFFSA IMSNFKIVKW LTKRPDLVNK LKVIYRWTTG ALRNENSNKI 60
61 IITAQVSFLR DEKFGTFFLS NEEIKPIIST FTEIMEINSH NLIYEKLLLI RGFLSKYPKL 120
121 MIETVTSWLP GEVLPRIIIG DEIYSMKILI TSIVVLLELL KKCLDFVDEH ERIYQCIMLS 180
181 PVCETIPEKF LSKLPL
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [487-712] |
1 11 21 31 41 51
| | | | | |
1 NSYDSANLDK VTIGHLLTQQ IKNYIVVKND NKIAMDLWLS MTGLLYDSGK RVYDLTSESN 60
61 KVWFDLNNLC FINNHPKTRL MSIKVWRIIT YCICTKISQK NQEGNKSLLS LLRTPFQMTL 120
121 PYVNDPSARE GIIYHLLGVV YTAFTSNKNL STDMFELFWD HLITPIYEDY VFKYDSIHLQ 180
181 NVLFTVLHLL IGGKNADVAL ERKYKKHIHP MSVIASEGVK LKDISS
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [713-779] |
1 11 21 31 41 51
| | | | | |
1 LPPQIIKREY DKIMKVVFQT VEVAISNVNL AHDLILTSLK HLPEDRKDQT HLESFSSLIL 60
61 KVTQNNK
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [780-876] |
1 11 21 31 41 51
| | | | | |
1 DTPIFRDFFG AVTSSFVYTF LDLFLRKNDS SLVNFNIQIS KVGISQGNMT LDLLKDVIRK 60
61 ARNETSEFLI IEKFLELDDK KTEVYAQNWV GSTLLPP
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [877-1110] |
1 11 21 31 41 51
| | | | | |
1 NISFREFQSL ANIVNKVPNE NSIENFLDLC LKLSFPVNLF TLLHVSMWSN NNFIYFIQSY 60
61 VSKNENKLNV DLITLLKTSL PGNPELFSGL LPFLRRNKFM DILEYCIHSN PNLLNSIPDL 120
121 NSDLLLKLLP RSRASYFAAN IKLFKCSEQL TLVRWLLKGQ QLEQLNQNFS EIENVLQNAS 180
181 DSELEKSEII RELLHLAMAN PIEPLFSGLL NFCIKNNMAD HLDEFCGNMT SEVL
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [1111-1248] |
1 11 21 31 41 51
| | | | | |
1 FKISPELLLK LLTYKEKPNG KLLAAVIEKI ENGDDDYILE LLEKIIIQKE IQILEKLKEP 60
61 LLVFFLNPVS SNMQKHKKST NMLRELVLLY LTKPLSRSAA KKFFSMLISI LPPNPNYQTI 120
121 DMVNLLIDLI KSHNRKFK
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [1249-1491] |
1 11 21 31 41 51
| | | | | |
1 DKRTYNATLK TIGKWIQESG VVHQGDSSKE IEAIPDTKSM YIPCEGSENK LSNLQRKVDS 60
61 QDIQVPATQG MKEPPSSIQI SSQISAKDSD SISLKNTAIM NSSQQESHAN RSRSIDDETL 120
121 EEVDNESIRE IDQQMKSTQL DKNVANHSNI CSTKSDEVDV TELHESIDTQ SSEVNAYQPI 180
181 EVLTSELKAV TNRSIKTNPD HNVVNSDNPL KRPSKETPTS ENKRSKGHET MVDVLVSEEQ 240
241 AVS
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [1492-1669] |
1 11 21 31 41 51
| | | | | |
1 PSSDVICTNI KSIANEESSL ALRNSIKVET NCNENSLNVT LDLDQQTITK EDGKGQVEHV 60
61 QRQENQESMN KINSKSFTQD NIAQYKSVKK ARPNNEGENN DYACNVEQAS PVRNEVPGDG 120
121 IQIPSGTILL NSSKQTEKSK VDDLRSDEDE HGTVAQEKHQ VGAINSRNKN NDRMDSTP
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [1670-1916] |
1 11 21 31 41 51
| | | | | |
1 IQGTEEESRE VVMTEEGINV RLEDSGTCEL NKNLKGPLKG DKDANINDDF VPVEENVRDE 60
61 GFLKSMEHAV SKETGLEEQP EVADISVLPE IRIPIFNSLK MQGSKSQIKE KLKKRLQRNE 120
121 LMPPDSPPRM TENTNINAQN GLDTVPKTIG GKEKHHEIQL GQAHTEADGE PLLGGDGNED 180
181 ATSREATPSL KVHFFSKKSR RLVARLRGFT PGDLNGISVE ERRNLRIELL DFMMRLEYYS 240
241 NRDNDMN
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
