YRC Public Data Repository - Protein Structure Prediction

Protein:	AIM5
Organism:	Saccharomyces cerevisiae
Length:	106 amino acids
Reference:	Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for AIM5.

Description	E-value	Query Range	Subject Range
gi\|6523566, gi\|2... - gi\|6523566\|emb\|CAB62287.1\| hypothetical protein [Zygosaccharomyces rouxii], gi\|238938236\|emb\|CAR2641... MIC12_ZYGRC - MICOS complex subunit MIC12 OS=Zygosaccharomyces rouxii (strain ATCC 2623 / CBS 732 / NBRC 1130 / NC...	154.0	[0..4]	[105..1]
gi\|49526959 - gi\|49526959\|emb\|CAG60586.1\| unnamed protein product [Candida glabrata] MIC12_CANGA - MICOS complex subunit MIC12 OS=Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 /...	86.0	[0..4]	[102..1]
gi\|49644310\|emb\|... - unnamed protein product [Kluyveromyces lactis NRRL Y-1140] MIC12_KLULA - MICOS complex subunit MIC12 OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC ...	80.0	[0..4]	[105..1]
gi\|45199132, gi\|... - gi\|45199132\|ref\|NP_986161.1\| AFR614Wp [Ashbya gossypii ATCC 10895], gi\|44985272\|gb\|AAS53985.1\| AFR61... gi\|44985272 - gi\|44985272\|gb\|AAS53985.1\| AFR614Wp [Ashbya gossypii ATCC 10895]	75.0	[0..4]	[103..30]

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Predicted Domain #1

Region A:
Residues: [1-106]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSKLGPLARS VKWTLSVGVI GSVFYLYRYS NNGYFYDHDA TWLKQDHQVQ DLVDRKEVVP  60
   61 GETRNRKLVV TDDGTAWSRT MGESIKDIWN EQIRNSVDWI YSWGKN

[Run NCBI BLAST on this sequence.]

Detection Method:

deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits