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View Structure Prediction Details

Protein: AIM5
Organism: Saccharomyces cerevisiae
Length: 106 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for AIM5.

Description E-value Query
Range
Subject
Range
gi|6523566, gi|2... - gi|6523566|emb|CAB62287.1| hypothetical protein [Zygosaccharomyces rouxii], gi|238938236|emb|CAR2641...
MIC12_ZYGRC - MICOS complex subunit MIC12 OS=Zygosaccharomyces rouxii (strain ATCC 2623 / CBS 732 / NBRC 1130 / NC...
154.0 [0..4] [105..1]
gi|49526959 - gi|49526959|emb|CAG60586.1| unnamed protein product [Candida glabrata]
MIC12_CANGA - MICOS complex subunit MIC12 OS=Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 /...
86.0 [0..4] [102..1]
gi|49644310|emb|... - unnamed protein product [Kluyveromyces lactis NRRL Y-1140]
MIC12_KLULA - MICOS complex subunit MIC12 OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC ...
80.0 [0..4] [105..1]
gi|45199132, gi|... - gi|45199132|ref|NP_986161.1| AFR614Wp [Ashbya gossypii ATCC 10895], gi|44985272|gb|AAS53985.1| AFR61...
gi|44985272 - gi|44985272|gb|AAS53985.1| AFR614Wp [Ashbya gossypii ATCC 10895]
75.0 [0..4] [103..30]

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Predicted Domain #1
Region A:
Residues: [1-106]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSKLGPLARS VKWTLSVGVI GSVFYLYRYS NNGYFYDHDA TWLKQDHQVQ DLVDRKEVVP  60
   61 GETRNRKLVV TDDGTAWSRT MGESIKDIWN EQIRNSVDWI YSWGKN

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

    MCM
Score
SCOP
Match
SCOP Description
View Download 0.502 d.95.2 Homing endonucleases
View Download 0.502 d.95.2 Homing endonucleases
View Download 0.491 d.15.6 Superantigen toxins, C-terminal domain
View Download 0.447 g.7.1 Snake toxin-like
View Download 0.447 g.7.1 Snake toxin-like
View Download 0.440 c.97.1 Cytidine deaminase-like
View Download 0.434 b.1.18 E set domains
View Download 0.399 a.74.1 Cyclin-like
View Download 0.385 a.71.2 Helical domain of Sec23/24
View Download 0.363 c.55.4 Translational machinery components
View Download 0.296 a.159.3 Description not found.
View Download 0.292 d.34.1 DNA-binding domain of Mlu1-box binding protein MBP1
View Download 0.273 c.47.1 Thioredoxin-like


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle