YRC Public Data Repository - Protein Structure Prediction

Protein:	ALG7
Organism:	Saccharomyces cerevisiae
Length:	448 amino acids
Reference:	Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ALG7.

Description	E-value	Query Range	Subject Range
gi\|151946629 - gi\|151946629\|gb\|EDN64851.1\| UDP-N-acetylglucosamine-1-P transferase [Saccharomyces cerevisiae YJM789... GPT_YEAST - UDP-N-acetylglucosamine--dolichyl-phosphate N-acetylglucosaminephosphotransferase OS=Saccharomyces c... ALG7 - UDP-N-acetyl-glucosamine-1-P transferase, transfers Glc-Nac-P from UDP-GlcNac to Dol-P in the ER in ... gi\|190408607 - gi\|190408607\|gb\|EDV11872.1\| UDP-N-acetyl-glucosamine-1-P transferase [Saccharomyces cerevisiae RM11-... gi\|207347499 - gi\|207347499\|gb\|EDZ73650.1\| YBR243Cp-like protein [Saccharomyces cerevisiae AWRI1631]	2.0E-99	[1..448]	[1..448]
gi\|145231987 - gi\|145231987\|ref\|XP_001399460.1\| hypothetical protein An02g03240 [Aspergillus niger] gi\|18677129, gi\|... - gi\|18677129\|gb\|AAL78196.1\|AF126048_1 UDP-N-acetylglucosamine:dolichyl phosphate N-acetylglucosamine-...	8.0E-86	[3..444]	[16..462]
gpt2 - UDP-N-acetylglucosamine--dolichyl-phosphateN-acetylglucosaminephosphotransferase GPT_SCHPO - UDP-N-acetylglucosamine--dolichyl-phosphate N-acetylglucosaminephosphotransferase OS=Schizosaccharom...	2.0E-84	[5..444]	[6..446]
GPT_CRIGR - UDP-N-acetylglucosamine--dolichyl-phosphate N-acetylglucosaminephosphotransferase OS=Cricetulus gris...	8.0E-83	[17..440]	[3..407]
GPT_CRILO - UDP-N-acetylglucosamine--dolichyl-phosphate N-acetylglucosaminephosphotransferase OS=Cricetulus long... gi\|109413 - pir\|\|A37813 UDP-N-acetylglucosamine-dolichyl-phosphate N-acetylglucosaminephosphotransferase (EC 2.7...	9.0E-83	[17..440]	[3..407]
gi\|12002052 - gi\|12002052\|gb\|AAG43168.1\| GlcNAc-1-P transferase [Homo sapiens]	3.0E-82	[17..440]	[3..407]
GPT_MOUSE - UDP-N-acetylglucosamine--dolichyl-phosphate N-acetylglucosaminephosphotransferase OS=Mus musculus GN...	3.0E-82	[20..440]	[8..409]
gi\|2569954 - gi\|2569954\|emb\|CAA67366.1\| UDP-N-acetylglucosamine--dolichyl- phosphateN-acetylglucosaminephosphotra...	7.0E-74	[25..442]	[52..482]

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Predicted Domain #1

Region A:
Residues: [1-115]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLRLFSLALI TCLIYYSKNQ GPSALVAAVG FGIAGYLATD MLIPRVGKSF IKIGLFGKDL  60
   61 SKPGRPVLPE TIGAIPAAVY LFVMFIYIPF IFYKYMVITT SGGGHRDVSV VEDNG

[Run NCBI BLAST on this sequence.]

Detection Method:

deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2

Region A:
Residues: [116-339]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNSNIFPHDK LSEYLSAILC LESTVLLGIA DDLFDLRWRH KFFLPAIAAI PLLMVYYVDF  60
   61 GVTHVLIPGF MERWLKKTSV DLGLWYYVYM ASMAIFCPNS INILAGVNGL EVGQCIVLAI 120
  121 LALLNDLLYF SMGPLATRDS HRFSAVLIIP FLGVSLALWK WNRWPATVFV GDTYCYFAGM 180
  181 VFAVVGILGH FSKTMLLLFI PQIVNFIYSC PQLFKLVPCP RHRL

[Run NCBI BLAST on this sequence.]

Detection Method:	Pfam
Confidence:	84.356547
Match:	PF00953
Description:	Glycosyl transferase family 4

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3

Region A:
Residues: [340-448]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PKFNEKDGLM YPSRANLKEE PPKSIFKPIL KLLYCLHLID LEFDENNEII STSNMTLINL  60
   61 TLVWFGPMRE DKLCNTILKL QFCIGILALL GRHAIGAIIF GHDNLWTVR

[Run NCBI BLAST on this sequence.]

Detection Method:

MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits