YRC Public Data Repository - Protein Structure Prediction

Protein:	DAD3
Organism:	Saccharomyces cerevisiae
Length:	94 amino acids
Reference:	Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for DAD3.

Description	E-value	Query Range	Subject Range
gi\|39978223, gi\|... - gi\|39978223\|ref\|XP_370499.1\| hypothetical protein MG06996.4 [Magnaporthe grisea 70-15], gb\|EAA55339....	96.0	[0..5]	[85..57]
gi\|85080092 - gi\|85080092\|ref\|XP_956477.1\| hypothetical protein NCU01799 [Neurospora crassa OR74A] gi\|28917543, gi\|... - gi\|32415517\|ref\|XP_328238.1\| predicted protein [Neurospora crassa], gi\|28917543\|gb\|EAA27241.1\| conse...	93.0	[0..5]	[83..17]
gi\|46107530, gi\|... - gi\|46107530\|ref\|XP_380824.1\| hypothetical protein FG00648.1 [Gibberella zeae PH-1], gi\|42545535\|gb\|E...	86.0	[0..5]	[83..15]
DAD3_KLULA - DASH complex subunit DAD3 OS=Kluyveromyces lactis GN=DAD3 PE=3 SV=1 DAD3_KLULA - DASH complex subunit DAD3 OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 12...	74.0	[0..1]	[92..1]
DAD3_ASHGO - DASH complex subunit DAD3 OS=Ashbya gossypii GN=DAD3 PE=3 SV=1 DAD3_ASHGO - DASH complex subunit DAD3 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-10...	73.0	[0..1]	[94..1]
gi\|169775255 - gi\|169775255\|ref\|XP_001822095.1\| hypothetical protein [Aspergillus oryzae RIB40] gi\|83769958 - gi\|83769958\|dbj\|BAE60093.1\| unnamed protein product [Aspergillus oryzae]	70.0	[0..5]	[83..26]
gi\|114195380, gi... - gi\|115387581\|ref\|XP_001211296.1\| conserved hypothetical protein [Aspergillus terreus NIH2624], gi\|11...	70.0	[0..5]	[88..89]
gi\|169623494, gi... - gi\|169623494\|ref\|XP_001805154.1\| hypothetical protein SNOG_14989 [Phaeosphaeria nodorum SN15], gi\|11...	69.0	[0..5]	[87..22]
gi\|67515723, gi\|... - gi\|67515723\|ref\|XP_657747.1\| hypothetical protein AN0143.2 [Aspergillus nidulans FGSC A4], ref\|XP_40...	66.0	[0..5]	[83..38]
gi\|119187329, gi... - gi\|90303057\|gb\|EAS32688.1\| hypothetical protein CIMG_03712 [Coccidioides immitis RS], gi\|119187329\|r...	63.0	[0..5]	[73..30]

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Predicted Domain #1

Region A:
Residues: [1-94]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEHNLSPLQQ EVLDKYKQLS LDLKALDETI KELNYSQHRQ QHSQQETVSP DEILQEMRDI  60
   61 EVKIGLVGTL LKGSVYSLIL QRKQEQESLG SNSK

[Run NCBI BLAST on this sequence.]

Detection Method:	Pfam
Confidence:	47.29243
Match:	PF08656.1
Description:	No description for PF08656.1 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

		MCM Score	GO Score	GO Term	SCOP Match	SCOP Description
View	Download	0.934	N/A	N/A	a.2.17	Description not found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits