| Protein: | ROT2 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 954 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ROT2.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..954] | [1..954] |
|
|
0.0 | [7..952] | [18..940] |
|
|
0.0 | [7..952] | [19..941] |
|
|
0.0 | [7..952] | [19..963] |
|
|
0.0 | [4..952] | [4..918] |
|
|
0.0 | [1..952] | [6..940] |
|
|
0.0 | [3..953] | [5..917] |
|
Region A: Residues: [1-82] |
1 11 21 31 41 51
| | | | | |
1 MVLLKWLVCQ LVFFTAFSHA FTDYLLKKCA QSGFCHRNRV YAENIAKSHH CYYKVDAESI 60
61 AHDPLENVLH ATIIKTIPRL EG
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.933 | 0.026 | alpha-glucosidase activity | d.45.1 | ClpS-like |
|
Region A: Residues: [83-390] |
1 11 21 31 41 51
| | | | | |
1 DDIAVQFPFS LSFLQDHSVR FTINEKERMP TNSSGLLISS QRFNETWKYA FDKKFQEEAN 60
61 RTSIPQFHFL KQKQTVNSFW SKISSFLSLS NSTADTFHLR NGDVSVEIFA EPFQLKVYWQ 120
121 NALKLIVNEQ NFLNIEHHRT KQENFAHVLP EETTFNMFKD NFLYSKHDSM PLGPESVALD 180
181 FSFMGSTNVY GIPEHATSLR LMDTSGGKEP YRLFNVDVFE YNIGTSQPMY GSIPFMFSSS 240
241 STSIFWVNAA DTWVDIKYDT SKNKTMTHWI SENGVIDVVM SLGPDIPTII DKFTDLTGRP 300
301 FLPPISSI
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [391-586] |
1 11 21 31 41 51
| | | | | |
1 GYHQCRWNYN DEMDVLTVDS QMDAHMIPYD FIWLDLEYTN DKKYFTWKQH SFPNPKRLLS 60
61 KLKKLGRNLV VLIDPHLKKD YEISDRVINE NVAVKDHNGN DYVGHCWPGN SIWIDTISKY 120
121 GQKIWKSFFE RFMDLPADLT NLFIWNDMNE PSIFDGPETT APKDLIHDNY IEERSVHNIY 180
181 GLSVHEATYD AIKSIY
|
| Detection Method: | |
| Confidence: | 2.154902 |
| Match: | 2taaA_ |
| Description: | Fungal alpha-amylase; Fungal alpha-amylases |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [587-814] |
1 11 21 31 41 51
| | | | | |
1 SPSDKRPFLL TRAFFAGSQR TAATWTGDNV ANWDYLKISI PMVLSNNIAG MPFIGADIAG 60
61 FAEDPTPELI ARWYQAGLWY PFFRAHAHID TKRREPYLFN EPLKSIVRDI IQLRYFLLPT 120
121 LYTMFHKSSV TGFPIMNPMF IEHPEFAELY HIDNQFYWSN SGLLVKPVTE PGQSETEMVF 180
181 PPGIFYEFAS LHSFINNGTD LIEKNISAPL DKIPLFIEGG HIITMKDK
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [815-954] |
1 11 21 31 41 51
| | | | | |
1 YRRSSMLMKN DPYVIVIAPD TEGRAVGDLY VDDGETFGYQ RGEYVETQFI FENNTLKNVR 60
61 SHIPENLTGI HHNTLRNTNI EKIIIAKNNL QHNITLKDSI KVKKNGEESS LPTRSSYEND 120
121 NKITILNLSL DITEDWEVIF
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
