| Protein: | AMN1 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 549 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for AMN1.
| Description | E-value | Query Range |
Subject Range |
|
|
2.0E-71 | [18..548] | [123..670] |
|
|
2.0E-68 | [11..546] | [24..586] |
|
|
2.0E-67 | [40..546] | [67..589] |
|
|
3.0E-66 | [1..548] | [158..724] |
|
Region A: Residues: [1-65] |
1 11 21 31 41 51
| | | | | |
1 MKLERVSSNG SFKRGRDIQS LESPCTRPLK KMSPSPSFTS LKMEKPFKDI VRKYGGHLHQ 60
61 SSYNP
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.248 | d.58.17 | Metal-binding domain |
| View | Download | 0.412 | a.8.1 | Bacterial immunoglobulin/albumin-binding domains |
| View | Download | 0.396 | d.68.3 | SirA-like |
| View | Download | 0.237 | a.64.1 | Saposin |
| View | Download | 0.386 | a.64.2 | Bacteriocin AS-48 |
| View | Download | 0.236 | a.3.1 | Cytochrome c |
| View | Download | 0.230 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.222 | d.58.38 | Urease metallochaperone UreE, C-terminal domain |
| View | Download | 0.214 | c.51.1 | Anticodon-binding domain of Class II aaRS |
| View | Download | 0.210 | d.120.1 | Cytochrome b5 |
| View | Download | 0.207 | a.37.1 | A DNA-binding domain in eukaryotic transcription factors |
|
Region A: Residues: [66-156] |
1 11 21 31 41 51
| | | | | |
1 GSSKVELVRP DLSLKTDQSF LQSSVQTTPN KKSCNEYLST PEATPLKNTA TENAWATSRV 60
61 VSASSLSIVT PTEIKNILVD EFSELKLGQP L
|
| Detection Method: | |
| Confidence: | 7.39794 |
| Match: | 1jl5A_ |
| Description: | Leucine rich effector protein YopM |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [157-233] |
1 11 21 31 41 51
| | | | | |
1 TAQHQRSHAV FEIPEIVENI IKMIVSLESA NIPKERPCLR RNPQSYEHSL LMYKDEERAK 60
61 KAWSAAQQLR DPPLVGH
|
| Detection Method: | |
| Confidence: | 7.522879 |
| Match: | 2bnh__ |
| Description: | Ribonuclease inhibitor |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [234-296] |
1 11 21 31 41 51
| | | | | |
1 KEKKQGALFS CMMVNRLWLN VTRPFLFKSL HFKSVHNFKE FLRTSQETTQ VMRPSHFILH 60
61 KLH
|
| Detection Method: | |
| Confidence: | 7.522879 |
| Match: | 2bnh__ |
| Description: | Ribonuclease inhibitor |
| Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [297-347] |
1 11 21 31 41 51
| | | | | |
1 QVTQPDIERL SRMECQNLKW LEFYVCPRIT PPLSWFDNLH KLEKLIIPGN K
|
| Detection Method: | |
| Confidence: | 7.522879 |
| Match: | 2bnh__ |
| Description: | Ribonuclease inhibitor |
| Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [348-549] |
1 11 21 31 41 51
| | | | | |
1 NIDDNFLLRL SQSIPNLKHL VLRACDNVSD SGVVCIALNC PKLKTFNIGR HRRGNLITSV 60
61 SLVALGKYTQ VETVGFAGCD VDDAGIWEFA RLNGKNVERL SLNSCRLLTD YSLPILFALN 120
121 SFPNLAVLEI RNLDKITDVR HFVKYNLWKK SLDAPILIEA CERITKLIDQ EENRVKRINS 180
181 LVALKDMTAW VNADDEIENN VD
|
| Detection Method: | |
| Confidence: | 7.522879 |
| Match: | 2bnh__ |
| Description: | Ribonuclease inhibitor |
| Matching Structure (courtesy of the PDB): |
|
