Protein: | TFC1 |
Organism: | Saccharomyces cerevisiae |
Length: | 649 amino acids |
Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for TFC1.
Description | E-value | Query Range |
Subject Range |
|
554.0 | [0..30] | [645..25] |
|
514.0 | [0..26] | [649..57] |
|
500.0 | [0..1] | [649..1] |
|
441.0 | [0..56] | [499..21] |
|
437.0 | [0..56] | [503..36] |
|
437.0 | [0..56] | [503..27] |
|
436.0 | [0..56] | [503..36] |
Region A: Residues: [1-540] |
1 11 21 31 41 51 | | | | | | 1 MPVEEPLATL SSIPDSSADQ APPLIADEFT LDLPRIPSLE LPLNVSTKHS SIQKAIKMCG 60 61 GIEKVKEAFK EHGPIESQHG LQLYLNDDTD SDGSKSYFNE HPVIGKRVPF RDESVILKVT 120 121 MPKGTLSKNN NSVKDSIKSL KDSNKLRVTP VSIVDNTIKF REMSDFQIKL DNVPSAREFK 180 181 SSFGSLEWNN FKSFVNSVPD NDSQPQENIG NLILDRSVKI PSTDFQLPPP PKLSMVGFPL 240 241 LYKYKANPFA KKKKNGVTEV KGTYIKNYQL FVHDLSDKTV IPSQAHEQVL YDFEVAKKTK 300 301 VYPGTKSDSK FYESLEECLK ILRELFARRP IWVKRHLDGI VPKKIHHTMK IALALISYRF 360 361 TMGPWRNTYI KFGIDPRSSV EYAQYQTEYF KIERKLLSSP IVKKNVPKPP PLVFESDTPG 420 421 GIDSRFKFDG KRIPWYLMLQ IDLLIGEPNI AEVFHNVEYL DKANELTGWF KELDLVKIRR 480 481 IVKYELGCMV QGNYEYNKYK LKYFKTMLFV KESMVPENKN SEEGMGVNTN KDADGDINMD 540 541 |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
Region A: Residues: [541-649] |
1 11 21 31 41 51 | | | | | | 1 AGSQMSSNAI EEDKGIAAGD DFDDNGAITE EPDDAALENE EMDTDQNLKV PASIDDDVDD 60 61 VDADEEEQES FDVKTASFQD IINKIAKLDP KTAETMKSEL KGFVDEVDL |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
MCM Score |
SCOP Match |
SCOP Description | ||
View | Download | 0.397 | a.24.9 | alpha-catenin/vinculin |
View | Download | 0.380 | a.1.1 | Globin-like |
View | Download | 0.367 | a.182.1 | GatB/YqeY domain |
View | Download | 0.318 | a.80.1 | DNA polymerase III clamp loader subunits, C-terminal domain |
View | Download | 0.299 | f.56.1 | Description not found. |
View | Download | 0.267 | a.74.1 | Cyclin-like |
View | Download | 0.265 | a.74.1 | Cyclin-like |
View | Download | 0.208 | a.24.13 | Domain of the SRP/SRP receptor G-proteins |
View | Download | 0.208 | a.1.1 | Globin-like |
View | Download | 0.208 | a.74.1 | Cyclin-like |