| Protein: | UBP14 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 803 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for UBP14.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [22..802] | [7..832] |
|
|
0.0 | [22..802] | [7..831] |
|
|
0.0 | [22..802] | [7..855] |
|
|
0.0 | [22..802] | [7..855] |
|
|
0.0 | [22..802] | [2..825] |
|
|
0.0 | [23..802] | [1..773] |
|
|
0.0 | [22..802] | [2..795] |
|
Region A: Residues: [1-212] |
1 11 21 31 41 51
| | | | | |
1 MAVEMTGKFI QKESPKSFSH SEMAEAVLEN VNVPAVVSKD ECIYCFESPY NEPLALNASP 60
61 KHSLNICLNC FQATCNRHVP LHIRVTEYAC DTIHSNYLTI AKVEKPKQEN VEENNNNKKI 120
121 KLQVIETSED DTHNTIWSLQ RFNGENVPRT VLSKSTDSDI SSTALEKIEK ILKAKSQDFE 180
181 DKKNSWVLEI STCPHTENFQ IPSKPENTVN LN
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [213-318] |
1 11 21 31 41 51
| | | | | |
1 QCSSCDLTQN LWLCLHCGNI GCGREQIGID GHSHALDHYR SNNNHPLAIK LGSLSSSTYD 60
61 LYCYACDDET RFPDNVNLGS ALQIYGINIQ EKIADEKTLV QLQVEQ
|
| Detection Method: | |
| Confidence: | 30.346787 |
| Match: | PF02148 |
| Description: | Zn-finger in ubiquitin-hydrolases and other protein |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [319-377] |
1 11 21 31 41 51
| | | | | |
1 NENWQFRMVD SSGKEFEKLS ASKNYGCGLI NLGNSCYLNS VIQSLVNGGV PNWSLDFLG
|
| Detection Method: | |
| Confidence: | 9.0 |
| Match: | PF00442 |
| Description: | No description for PF00442 was found. |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [378-501] |
1 11 21 31 41 51
| | | | | |
1 SKFPLDVVYP DNNLKCQWIK LLNAMKCEPE LYPNGIKPTT FKKCIGQNHQ EFSSNRQQDA 60
61 MEFLTFLLDL LDKKFFSSSS SGIPNPNDLV RFMMEDRLQC NICGKVKYSY EPTEAIQIPL 120
121 EEND
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.892 | 0.125 | protein deubiquitination | a.118.8 | TPR-like |
|
Region A: Residues: [502-601] |
1 11 21 31 41 51
| | | | | |
1 EPQDMLERIK AYFEGQTIEF KCANCKEKVT ANKKPGFKSL PQTLILNPIR IRLQNWIPVK 60
61 TSNELSLPGL IDRDDMLDVS SYLSQGFDPQ TENLLPDEDE
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [602-661] |
1 11 21 31 41 51
| | | | | |
1 NRSSFTPNQC SISQLIEMGF TQNASVRALF NTGNQDAESA MNWLFQHMDD PDLNDPFVPP 60
61
|
| Detection Method: | |
| Confidence: | 6.408935 |
| Match: | PF00627 |
| Description: | UBA/TS-N domain |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [662-726] |
1 11 21 31 41 51
| | | | | |
1 PNVPKKDKRE VDEVSLTSML SMGLNPNLCR KALILNNGDV NRSVEWVFNN MDDDGTFPEP 60
61 EVPNE
|
| Detection Method: | |
| Confidence: | 5.638272 |
| Match: | PF00627 |
| Description: | UBA/TS-N domain |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [727-803] |
1 11 21 31 41 51
| | | | | |
1 EQQQKKDLGY STAKPYALTA VICHKGNSVH SGHYVVFIRK LVADKWKWVL YNDEKLVAAD 60
61 SIEDMKKNGY IYFYTRC
|
| Detection Method: | |
| Confidence: | 22.124939 |
| Match: | PF00443 |
| Description: | Ubiquitin carboxyl-terminal hydrolase |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
