| Protein: | CHS2 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 963 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CHS2.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..963] | [1..963] |
|
|
0.0 | [60..961] | [2..943] |
|
|
0.0 | [60..933] | [2..918] |
|
|
0.0 | [60..933] | [2..912] |
|
|
0.0 | [54..933] | [3..886] |
|
|
0.0 | [11..933] | [5..919] |
|
|
0.0 | [25..933] | [3..897] |
|
|
0.0 | [39..943] | [4..904] |
|
Region A: Residues: [1-184] |
1 11 21 31 41 51
| | | | | |
1 MTRNPFMVEP SNGSPNRRGA SNLSKFYANA NSNSRWANPS EESLEDSYDQ SNVFQGLPAS 60
61 PSRAALRYSP DRRHRTQFYR DSAHNSPVAP NRYAANLQES PKRAGEAVIH LSEGSNLYPR 120
121 DNADLPVDPY HLSPQQQPSN NLFGSGRLYS QSSKYTMSTT STTAPSLAEA DDEKEKYLTS 180
181 TTSY
|
| Detection Method: |  |
| Confidence: | 11.82 |
| Match: | 1deqA |
| Description: | Fibrinogen |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [185-286] |
1 11 21 31 41 51
| | | | | |
1 DDQSTIFSAD TFNETKFELN HPTRQQYVRR ANSESKRRMV SDLPPPSKKK ALLKLDNPIP 60
61 KGLLDTLPRR NSPEFTEMRY TACTVEPDDF LREGYTLRFA EM
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.344 | c.58.1 | Aminoacid dehydrogenase-like, N-terminal domain |
|
Region A: Residues: [287-527] |
1 11 21 31 41 51
| | | | | |
1 NRECQIAICI TMYNEDKYSL ARTIHSIMKN VAHLCKREKS HVWGPNGWKK VSVILISDGR 60
61 AKVNQGSLDY LAALGVYQED MAKASVNGDP VKAHIFELTT QVSINADLDY VSKDIVPVQL 120
121 VFCLKEENKK KINSHRWLFN AFCPVLQPTV VTLVDVGTRL NNTAIYRLWK VFDMDSNVAG 180
181 AAGQIKTMKG KWGLKLFNPL VASQNFEYKI SNILDKPLES VFGYISVLPG ALSAYRYRAL 240
241 K
|
|
Region B: Residues: [578-603] |
1 11 21 31 41 51
| | | | | |
1 VLKYVKEATG ETDVPEDVSE FISQRR
|
| Detection Method: | |
| Confidence: | 11.34 |
| Match: | 1h7lA |
| Description: | Spore coat polysaccharide biosynthesis protein SpsA |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [528-577] |
1 11 21 31 41 51
| | | | | |
1 NHEDGTGPLR SYFLGETQEG RDHDVFTANM YLAEDRILCW ELVAKRDAKW
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|
Region B: Residues: [604-627] |
1 11 21 31 41 51
| | | | | |
1 RWLNGAMFAA IYAQLHFYQI WKTK
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| Detection Method: | |
| Confidence: | 11.34 |
| Match: | 1h7lA |
| Description: | Spore coat polysaccharide biosynthesis protein SpsA |
| Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [628-747] |
1 11 21 31 41 51
| | | | | |
1 HSVVRKFFLH VEFLYQFIQM LFSWFSIANF VLTFYYLAGS MNLVIKHGEA LFIFFKYLIF 60
61 CDLASLFIIS MGNRPQGAKH LFITSMVILS ICATYSLICG FVFAFKSLAS GTESHKIFVD 120
121
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.799 | 0.059 | cellular bud neck contractile ring | f.14.1 | Voltage-gated potassium channels |
| View | Download | 0.658 | 0.048 | cellular bud neck contractile ring | a.7.1 | Spectrin repeat |
| View | Download | 0.768 | 0.048 | cellular bud neck contractile ring | a.47.2 | t-snare proteins |
| View | Download | 0.772 | 0.032 | cellular bud neck contractile ring | a.2.7 | tRNA-binding arm |
| View | Download | 0.654 | 0.007 | cellular bud neck contractile ring | f.36.1 | Neurotransmitter-gated ion-channel pransmembrane pore |
| View | Download | 0.645 | N/A | N/A | a.7.1 | Spectrin repeat |
| View | Download | 0.631 | N/A | N/A | a.7.1 | Spectrin repeat |
| View | Download | 0.593 | N/A | N/A | a.29.5 | alpha-ketoacid dehydrogenase kinase, N-terminal domain |
| View | Download | 0.592 | N/A | N/A | a.2.7 | tRNA-binding arm |
| View | Download | 0.583 | N/A | N/A | a.7.2 | Enzyme IIa from lactose specific PTS, IIa-lac |
| View | Download | 0.582 | N/A | N/A | a.7.1 | Spectrin repeat |
| View | Download | 0.556 | N/A | N/A | a.7.2 | Enzyme IIa from lactose specific PTS, IIa-lac |
| View | Download | 0.545 | N/A | N/A | a.177.1 | Sigma2 domain of RNA polymerase sigma factors |
| View | Download | 0.528 | N/A | N/A | a.7.1 | Spectrin repeat |
| View | Download | 0.514 | N/A | N/A | a.26.1 | 4-helical cytokines |
| View | Download | 0.513 | N/A | N/A | a.47.2 | t-snare proteins |
| View | Download | 0.498 | N/A | N/A | a.25.1 | Ferritin-like |
| View | Download | 0.497 | N/A | N/A | a.24.9 | alpha-catenin/vinculin |
| View | Download | 0.491 | N/A | N/A | a.29.2 | Bromodomain |
| View | Download | 0.488 | N/A | N/A | a.47.2 | t-snare proteins |
| View | Download | 0.474 | N/A | N/A | a.2.7 | tRNA-binding arm |
| View | Download | 0.474 | N/A | N/A | a.24.14 | FAT domain of focal adhesion kinase |
| View | Download | 0.471 | N/A | N/A | a.24.1 | Apolipoprotein |
| View | Download | 0.470 | N/A | N/A | a.29.2 | Bromodomain |
| View | Download | 0.469 | N/A | N/A | a.63.1 | Apolipophorin-III |
| View | Download | 0.462 | N/A | N/A | a.47.2 | t-snare proteins |
| View | Download | 0.461 | N/A | N/A | a.2.7 | tRNA-binding arm |
| View | Download | 0.456 | N/A | N/A | a.25.1 | Ferritin-like |
| View | Download | 0.442 | N/A | N/A | a.24.5 | TMV-like viral coat proteins |
| View | Download | 0.428 | N/A | N/A | a.24.10 | Histidine-containing phosphotransfer domain, HPT domain |
| View | Download | 0.419 | N/A | N/A | d.19.1 | MHC antigen-recognition domain |
| View | Download | 0.419 | N/A | N/A | a.7.1 | Spectrin repeat |
| View | Download | 0.417 | N/A | N/A | a.2.7 | tRNA-binding arm |
| View | Download | 0.415 | N/A | N/A | a.24.14 | FAT domain of focal adhesion kinase |
| View | Download | 0.410 | N/A | N/A | a.133.1 | Phospholipase A2, PLA2 |
| View | Download | 0.402 | N/A | N/A | f.14.1 | Voltage-gated potassium channels |
| View | Download | 0.401 | N/A | N/A | f.13.1 | Family A G protein-coupled receptor-like |
| View | Download | 0.400 | N/A | N/A | a.24.1 | Apolipoprotein |
| View | Download | 0.400 | N/A | N/A | a.24.1 | Apolipoprotein |
| View | Download | 0.395 | N/A | N/A | a.90.1 | Transcription factor STAT-4 N-domain |
| View | Download | 0.392 | N/A | N/A | a.26.1 | 4-helical cytokines |
| View | Download | 0.372 | N/A | N/A | f.36.1 | Neurotransmitter-gated ion-channel pransmembrane pore |
| View | Download | 0.367 | N/A | N/A | f.32.1 | a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) |
| View | Download | 0.365 | N/A | N/A | a.24.14 | FAT domain of focal adhesion kinase |
| View | Download | 0.361 | N/A | N/A | a.7.1 | Spectrin repeat |
| View | Download | 0.360 | N/A | N/A | a.47.2 | t-snare proteins |
| View | Download | 0.359 | N/A | N/A | a.24.1 | Apolipoprotein |
| View | Download | 0.358 | N/A | N/A | a.7.7 | BAG domain |
| View | Download | 0.358 | N/A | N/A | a.8.3 | Families 57/38 glycoside transferase middle domain |
| View | Download | 0.358 | N/A | N/A | a.25.1 | Ferritin-like |
| View | Download | 0.354 | N/A | N/A | a.2.7 | tRNA-binding arm |
| View | Download | 0.351 | N/A | N/A | a.121.1 | Tetracyclin repressor-like, C-terminal domain |
| View | Download | 0.345 | N/A | N/A | f.14.1 | Voltage-gated potassium channels |
| View | Download | 0.342 | N/A | N/A | a.29.2 | Bromodomain |
| View | Download | 0.341 | N/A | N/A | f.21.2 | Fumarate reductase respiratory complex transmembrane subunits |
| View | Download | 0.339 | N/A | N/A | a.2.7 | tRNA-binding arm |
| View | Download | 0.336 | N/A | N/A | a.2.7 | tRNA-binding arm |
| View | Download | 0.329 | N/A | N/A | a.23.1 | HSC20 (HSCB), C-terminal oligomerisation domain |
| View | Download | 0.329 | N/A | N/A | a.2.11 | Fe,Mn superoxide dismutase (SOD), N-terminal domain |
| View | Download | 0.328 | N/A | N/A | a.62.1 | Hepatitis B viral capsid (hbcag) |
| View | Download | 0.327 | N/A | N/A | f.14.1 | Voltage-gated potassium channels |
| View | Download | 0.327 | N/A | N/A | f.36.1 | Neurotransmitter-gated ion-channel pransmembrane pore |
| View | Download | 0.325 | N/A | N/A | a.26.1 | 4-helical cytokines |
| View | Download | 0.320 | N/A | N/A | a.87.1 | DBL homology domain (DH-domain) |
| View | Download | 0.320 | N/A | N/A | a.29.2 | Bromodomain |
| View | Download | 0.318 | N/A | N/A | f.17.1 | F1F0 ATP synthase subunit C |
| View | Download | 0.316 | N/A | N/A | a.26.1 | 4-helical cytokines |
| View | Download | 0.308 | N/A | N/A | a.24.9 | alpha-catenin/vinculin |
| View | Download | 0.308 | N/A | N/A | f.32.1 | a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) |
| View | Download | 0.308 | N/A | N/A | f.36.1 | Neurotransmitter-gated ion-channel pransmembrane pore |
| View | Download | 0.307 | N/A | N/A | a.26.1 | 4-helical cytokines |
| View | Download | 0.306 | N/A | N/A | f.36.1 | Neurotransmitter-gated ion-channel pransmembrane pore |
| View | Download | 0.306 | N/A | N/A | d.81.1 | Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain |
| View | Download | 0.306 | N/A | N/A | f.14.1 | Voltage-gated potassium channels |
| View | Download | 0.306 | N/A | N/A | a.23.1 | HSC20 (HSCB), C-terminal oligomerisation domain |
| View | Download | 0.303 | N/A | N/A | f.17.1 | F1F0 ATP synthase subunit C |
| View | Download | 0.299 | N/A | N/A | a.24.14 | FAT domain of focal adhesion kinase |
| View | Download | 0.294 | N/A | N/A | a.23.1 | HSC20 (HSCB), C-terminal oligomerisation domain |
| View | Download | 0.290 | N/A | N/A | a.25.1 | Ferritin-like |
| View | Download | 0.289 | N/A | N/A | a.7.1 | Spectrin repeat |
| View | Download | 0.284 | N/A | N/A | a.24.1 | Apolipoprotein |
| View | Download | 0.283 | N/A | N/A | a.27.1 | Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases |
| View | Download | 0.281 | N/A | N/A | a.47.2 | t-snare proteins |
| View | Download | 0.280 | N/A | N/A | a.7.1 | Spectrin repeat |
| View | Download | 0.280 | N/A | N/A | a.121.1 | Tetracyclin repressor-like, C-terminal domain |
| View | Download | 0.278 | N/A | N/A | a.7.1 | Spectrin repeat |
| View | Download | 0.278 | N/A | N/A | a.24.9 | alpha-catenin/vinculin |
| View | Download | 0.274 | N/A | N/A | a.90.1 | Transcription factor STAT-4 N-domain |
| View | Download | 0.273 | N/A | N/A | a.29.2 | Bromodomain |
| View | Download | 0.272 | N/A | N/A | f.25.1 | Cytochrome c oxidase subunit III-like |
| View | Download | 0.272 | N/A | N/A | a.2.7 | tRNA-binding arm |
| View | Download | 0.271 | N/A | N/A | f.14.1 | Voltage-gated potassium channels |
| View | Download | 0.271 | N/A | N/A | a.24.9 | alpha-catenin/vinculin |
| View | Download | 0.268 | N/A | N/A | a.24.9 | alpha-catenin/vinculin |
| View | Download | 0.264 | N/A | N/A | a.47.2 | t-snare proteins |
| View | Download | 0.262 | N/A | N/A | a.2.8 | Eukaryotic DNA topoisomerase I, dispensable insert domain |
| View | Download | 0.262 | N/A | N/A | a.2.8 | Eukaryotic DNA topoisomerase I, dispensable insert domain |
| View | Download | 0.262 | N/A | N/A | d.87.2 | CO dehydrogenase flavoprotein C-terminal domain-like |
| View | Download | 0.262 | N/A | N/A | f.31.1 | Photosystem I reaction center subunit XI, PsaL |
| View | Download | 0.259 | N/A | N/A | a.118.1 | ARM repeat |
| View | Download | 0.258 | N/A | N/A | a.24.11 | Bacterial GAP domain |
| View | Download | 0.256 | N/A | N/A | a.24.3 | Cytochromes |
| View | Download | 0.255 | N/A | N/A | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.254 | N/A | N/A | f.32.1 | a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) |
| View | Download | 0.253 | N/A | N/A | d.81.1 | Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain |
| View | Download | 0.253 | N/A | N/A | f.14.1 | Voltage-gated potassium channels |
| View | Download | 0.253 | N/A | N/A | f.14.1 | Voltage-gated potassium channels |
| View | Download | 0.250 | N/A | N/A | a.29.3 | Acyl-CoA dehydrogenase C-terminal domain-like |
| View | Download | 0.249 | N/A | N/A | a.6.1 | Putative DNA-binding domain |
| View | Download | 0.248 | N/A | N/A | a.18.1 | T4 endonuclease V |
| View | Download | 0.247 | N/A | N/A | a.24.16 | Nucleotidyltransferase substrate binding subunit/domain |
| View | Download | 0.247 | N/A | N/A | a.24.3 | Cytochromes |
| View | Download | 0.245 | N/A | N/A | b.40.4 | Nucleic acid-binding proteins |
| View | Download | 0.245 | N/A | N/A | a.26.1 | 4-helical cytokines |
| View | Download | 0.245 | N/A | N/A | a.24.10 | Histidine-containing phosphotransfer domain, HPT domain |
| View | Download | 0.243 | N/A | N/A | a.24.13 | Domain of the SRP/SRP receptor G-proteins |
| View | Download | 0.243 | N/A | N/A | f.32.1 | a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) |
| View | Download | 0.242 | N/A | N/A | a.18.1 | T4 endonuclease V |
| View | Download | 0.242 | N/A | N/A | f.32.1 | a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) |
| View | Download | 0.242 | N/A | N/A | a.45.1 | Glutathione S-transferase (GST), C-terminal domain |
| View | Download | 0.242 | N/A | N/A | d.58.21 | Molybdenum cofactor biosynthesis protein C, MoaC |
| View | Download | 0.241 | N/A | N/A | a.24.9 | alpha-catenin/vinculin |
| View | Download | 0.240 | N/A | N/A | a.47.2 | t-snare proteins |
| View | Download | 0.240 | N/A | N/A | a.26.1 | 4-helical cytokines |
| View | Download | 0.234 | N/A | N/A | a.2.11 | Fe,Mn superoxide dismutase (SOD), N-terminal domain |
| View | Download | 0.232 | N/A | N/A | a.45.1 | Glutathione S-transferase (GST), C-terminal domain |
| View | Download | 0.228 | N/A | N/A | a.25.1 | Ferritin-like |
| View | Download | 0.228 | N/A | N/A | f.1.3 | delta-Endotoxin (insectocide), N-terminal domain |
| View | Download | 0.227 | N/A | N/A | f.17.2 | Cytochrome c oxidase subunit II-like, transmembrane region |
| View | Download | 0.227 | N/A | N/A | a.26.1 | 4-helical cytokines |
| View | Download | 0.227 | N/A | N/A | f.17.2 | Cytochrome c oxidase subunit II-like, transmembrane region |
| View | Download | 0.226 | N/A | N/A | a.19.1 | Fertilization protein |
| View | Download | 0.225 | N/A | N/A | a.7.2 | Enzyme IIa from lactose specific PTS, IIa-lac |
| View | Download | 0.225 | N/A | N/A | a.8.3 | Families 57/38 glycoside transferase middle domain |
| View | Download | 0.223 | N/A | N/A | f.14.1 | Voltage-gated potassium channels |
| View | Download | 0.223 | N/A | N/A | a.2.11 | Fe,Mn superoxide dismutase (SOD), N-terminal domain |
| View | Download | 0.223 | N/A | N/A | a.25.1 | Ferritin-like |
| View | Download | 0.223 | N/A | N/A | a.24.9 | alpha-catenin/vinculin |
| View | Download | 0.221 | N/A | N/A | f.14.1 | Voltage-gated potassium channels |
| View | Download | 0.221 | N/A | N/A | d.19.1 | MHC antigen-recognition domain |
| View | Download | 0.220 | N/A | N/A | d.173.1 | Methionine synthase activation domain-like |
| View | Download | 0.219 | N/A | N/A | a.26.1 | 4-helical cytokines |
| View | Download | 0.219 | N/A | N/A | a.24.10 | Histidine-containing phosphotransfer domain, HPT domain |
| View | Download | 0.217 | N/A | N/A | a.7.1 | Spectrin repeat |
| View | Download | 0.216 | N/A | N/A | a.7.3 | Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain |
| View | Download | 0.214 | N/A | N/A | a.2.6 | Effector domain of the protein kinase pkn/prk1 |
| View | Download | 0.214 | N/A | N/A | a.47.2 | t-snare proteins |
| View | Download | 0.213 | N/A | N/A | a.2.8 | Eukaryotic DNA topoisomerase I, dispensable insert domain |
| View | Download | 0.211 | N/A | N/A | f.1.3 | delta-Endotoxin (insectocide), N-terminal domain |
| View | Download | 0.209 | N/A | N/A | a.118.9 | ENTH/VHS domain |
| View | Download | 0.209 | N/A | N/A | a.118.8 | TPR-like |
| View | Download | 0.209 | N/A | N/A | a.8.3 | Families 57/38 glycoside transferase middle domain |
| View | Download | 0.208 | N/A | N/A | a.24.9 | alpha-catenin/vinculin |
| View | Download | 0.205 | N/A | N/A | a.24.12 | Outer surface protein C (OspC) |
| View | Download | 0.205 | N/A | N/A | a.47.2 | t-snare proteins |
| View | Download | 0.205 | N/A | N/A | g.52.1 | Inhibitor of apoptosis (IAP) repeat |
| View | Download | 0.205 | N/A | N/A | i.1.1 | Ribosome and ribosomal fragments |
| View | Download | 0.205 | N/A | N/A | f.32.1 | a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) |
| View | Download | 0.204 | N/A | N/A | d.81.1 | Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain |
| View | Download | 0.202 | N/A | N/A | f.32.1 | a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) |
| View | Download | 0.200 | N/A | N/A | a.24.14 | FAT domain of focal adhesion kinase |
|
Region A: Residues: [748-963] |
1 11 21 31 41 51
| | | | | |
1 IVISLLSTYG LYFFSSLMYL DPWHMFTSSI QYFLTLPAFT CTLQIFAFCN THDVSWGTKG 60
61 STQESKQLSK AIVVQGPDGK QIVETDWPQE VDKKFLEIKS RLKEPEFEES SGNEKQSKND 120
121 YYRDIRTRIV MIWMLSNLIL IMSIIQVFTP QDTDNGYLIF ILWSVAALAA FRVVGSMAFL 180
181 FMKYLRIIVS YRNKVEGSGS WEVSKLDLPN VFHKKG
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
