| Protein: | SCO1 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 295 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SCO1.
| Description | E-value | Query Range |
Subject Range |
|
|
219.0 | [0..23] | [294..27] |
|
|
217.0 | [0..110] | [292..6] |
|
|
216.0 | [0..112] | [292..8] |
|
|
216.0 | [0..107] | [292..1] |
|
|
215.0 | [0..110] | [291..7] |
|
|
215.0 | [0..104] | [294..1] |
|
Region A: Residues: [1-109] |
1 11 21 31 41 51
| | | | | |
1 MLKLSRSANL RLVQLPAARL SGNGAKLLTQ RGFFTVTRLW QSNGKKPLSR VPVGGTPIKD 60
61 NGKVREGSIE FSTGKAIALF LAVGGALSYF FNREKRRLET QKEAEANRG
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.338 | b.55.1 | PH domain-like |
| View | Download | 0.316 | b.55.1 | PH domain-like |
| View | Download | 0.312 | b.55.1 | PH domain-like |
| View | Download | 0.293 | d.110.3 | PYP-like sensor domain (PAS domain) |
| View | Download | 0.256 | b.55.1 | PH domain-like |
|
Region A: Residues: [110-295] |
1 11 21 31 41 51
| | | | | |
1 YGKPSLGGPF HLEDMYGNEF TEKNLLGKFS IIYFGFSNCP DICPDELDKL GLWLNTLSSK 60
61 YGITLQPLFI TCDPARDSPA VLKEYLSDFH PSILGLTGTF DEVKNACKKY RVYFSTPPNV 120
121 KPGQDYLVDH SIFFYLMDPE GQFVDALGRN YDEKTGVDKI VEHVKSYVPA EQRAKQKEAW 180
181 YSFLFK
|
| Detection Method: | |
| Confidence: | 43.0 |
| Match: | 2b7jA |
| Description: | No description for 2b7jA was found. |
