| Protein: | CDS1 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 457 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CDS1.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..457] | [1..457] |
|
|
0.0 | [6..436] | [12..439] |
|
|
0.0 | [6..436] | [12..438] |
|
|
0.0 | [20..436] | [3..416] |
|
|
0.0 | [10..434] | [37..456] |
|
|
0.0 | [6..434] | [33..465] |
|
|
0.0 | [7..430] | [25..444] |
|
Region A: Residues: [1-179] |
1 11 21 31 41 51
| | | | | |
1 MSDNPEMKPH GTSKEIVESV TDATSKAIDK LQEELHKDAS ESVTPVTKES TAATKESRKY 60
61 NFFIRTVWTF VMISGFFITL ASGHAWCIVL ILGCQIATFK ECIAVTSASG REKNLPLTKT 120
121 LNWYLLFTTI YYLDGKSLFK FFQATFYEYP VLNFIVTNHK FICYCLYLMG FVLFVCSLR
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [180-457] |
1 11 21 31 41 51
| | | | | |
1 KGFLKFQFGS LCVTHMVLLL VVFQAHLIIK NVLNGLFWFL LPCGLVIVND IFAYLCGITF 60
61 GKTKLIEISP KKTLEGFLGA WFFTALASII LTRILSPYTY LTCPVEDLHT NFFSNLTCEL 120
121 NPVFLPQVYR LPPIFFDKVQ INSITVKPIY FHALNLATFA SLFAPFGGFF ASGLKRTFKV 180
181 KDFGHSIPGH GGITDRVDCQ FIMGSFANLY YETFISEHRI TVDTVLSTIL MNLNDKQIIE 240
241 LIDILIRFLS KKGIISAKNF EKLADIFNVT KKSLTNHS
|
| Detection Method: | |
| Confidence: | 89.0 |
| Match: | PF01148 |
| Description: | Cytidylyltransferase family |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
