| Protein: | SKT5 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 696 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SKT5.
| Description | E-value | Query Range |
Subject Range |
|
|
406.0 | [0..15] | [678..1] |
|
|
282.0 | [0..128] | [691..312] |
|
|
278.0 | [0..86] | [691..215] |
|
|
254.0 | [0..214] | [696..94] |
|
|
248.0 | [0..37] | [562..394] |
|
|
244.0 | [0..246] | [691..34] |
|
|
238.0 | [0..224] | [666..106] |
|
|
235.0 | [0..101] | [678..19] |
|
|
228.0 | [0..149] | [542..207] |
|
Region A: Residues: [1-106] |
1 11 21 31 41 51
| | | | | |
1 MASSPQVHPY KKHLMQSQHI NFDNRGLQFQ NSSLKVGQDF SDNKENRENR DNEDFSTADL 60
61 PKRSANQPLI NEHLRAASVP LLSNDIGNSQ EEDFVPVPPP QLHLNN
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [107-220] |
1 11 21 31 41 51
| | | | | |
1 SNNTSLSSLG STPTNSPSPG ALRQTNSSTS LTKEQIKKRT RSVDLSHMYL LNGSSDTQLT 60
61 ATNESVADLS HQMISRYLGG KNNTSLVPRL KTIEMYRQNV KKSKDPEVLF QYAQ
|
| Detection Method: | |
| Confidence: | 6.154902 |
| Match: | 1fchA |
| Description: | Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor) |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [221-289] |
1 11 21 31 41 51
| | | | | |
1 YMLQTALTIE SSNALVQDSD KEGNVSQSDL KLQFLKEAQS YLKKLSIKGY SDAQYLLADG 60
61 YSSGAFGKI
|
| Detection Method: | |
| Confidence: | 6.154902 |
| Match: | 1fchA |
| Description: | Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor) |
| Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [290-379] |
1 11 21 31 41 51
| | | | | |
1 ENKEAFVLFQ AAAKHGHIES AYRASHCLEE GLGTTRDSRK SVNFLKFAAS RNHPSAMYKL 60
61 GLYSFYGRMG LPTDVNTKLN GVKWLSRAAA
|
| Detection Method: | |
| Confidence: | 6.154902 |
| Match: | 1fchA |
| Description: | Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor) |
| Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [380-424] |
1 11 21 31 41 51
| | | | | |
1 RANELTAAAP YELAKIYHEG FLDVVIPDEK YAMELYIQAA SLGHV
|
| Detection Method: | |
| Confidence: | 2.69897 |
| Match: | 1a17A |
| Description: | TETRATRICOPEPTIDE REPEATS OF PROTEIN PHOSPHATASE 5 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [425-552] |
1 11 21 31 41 51
| | | | | |
1 PSATLLAQIY ETGNDTVGQD TSLSVHYYTQ AALKGDSVAM LGLCAWYLLG AEPAFEKDEN 60
61 EAFQWALRAA NAGLPKAQFT LGYFYEHGKG CDRNMEYAWK WYEKAAGNED KRAINKLRSR 120
121 DGGLASIG
|
| Detection Method: | |
| Confidence: | 2.69897 |
| Match: | 1a17A |
| Description: | TETRATRICOPEPTIDE REPEATS OF PROTEIN PHOSPHATASE 5 |
| Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [553-696] |
1 11 21 31 41 51
| | | | | |
1 KKQHKKNKSI STLNLFSTVD SQTSNVGSNS RVSSKSETFF TGNPKRDREP QGLQINMNSN 60
61 TNRNGIKTGS DTSIRKSSSS AKGMSREVAE QSMAAKQEVS LSNMGSSNMI RKDFPAVKTE 120
121 SKKPTSLKNK KDKQGKKKKD CVIM
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
