| Protein: | PTH2 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 214 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PTH2.
| Description | E-value | Query Range |
Subject Range |
|
|
4.0E-70 | [1..214] | [1..214] |
|
|
9.0E-57 | [13..214] | [3..179] |
|
|
4.0E-56 | [14..214] | [1..176] |
|
|
9.0E-49 | [24..213] | [12..173] |
|
|
4.0E-48 | [14..214] | [6..205] |
|
|
2.0E-47 | [21..213] | [5..168] |
|
|
3.0E-46 | [27..213] | [19..188] |
|
Region A: Residues: [1-89] |
1 11 21 31 41 51
| | | | | |
1 MITSFLMEKM TVSSNYTIAL WATFTAISFA VGYQLGTSNA SSTKKSSATL LRSKEMKEGK 60
61 LHNDTDEEES ESEDESDEDE DIESTSLND
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.639 | d.58.4 | Dimeric alpha+beta barrel |
| View | Download | 0.646 | d.58.18 | Regulatory domain in the aminoacid metabolism |
| View | Download | 0.395 | a.24.13 | Domain of the SRP/SRP receptor G-proteins |
| View | Download | 0.684 | d.58.34 | Formiminotransferase domain of formiminotransferase-cyclodeaminase. |
| View | Download | 0.684 | d.58.34 | Formiminotransferase domain of formiminotransferase-cyclodeaminase. |
| View | Download | 0.646 | d.58.18 | Regulatory domain in the aminoacid metabolism |
| View | Download | 0.639 | d.58.4 | Dimeric alpha+beta barrel |
| View | Download | 0.601 | d.54.1 | Enolase N-terminal domain-like |
| View | Download | 0.601 | d.54.1 | Enolase N-terminal domain-like |
| View | Download | 0.395 | a.24.13 | Domain of the SRP/SRP receptor G-proteins |
| View | Download | 0.372 | a.74.1 | Cyclin-like |
| View | Download | 0.371 | d.58.17 | Metal-binding domain |
| View | Download | 0.367 | a.177.1 | Sigma2 domain of RNA polymerase sigma factors |
| View | Download | 0.358 | d.52.7 | Ribosome-binding factor A, RbfA |
| View | Download | 0.316 | a.68.1 | Wiscott-Aldrich syndrome protein, WASP, C-terminal domain |
| View | Download | 0.278 | b.40.2 | Bacterial enterotoxins |
| View | Download | 0.276 | d.52.3 | Prokaryotic type KH domain (KH-domain type II) |
| View | Download | 0.254 | a.144.1 | PABC (PABP) domain |
| View | Download | 0.250 | b.71.1 | Glycosyl hydrolase domain |
| View | Download | 0.235 | d.67.2 | Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain |
| View | Download | 0.223 | a.80.1 | DNA polymerase III clamp loader subunits, C-terminal domain |
| View | Download | 0.217 | a.39.1 | EF-hand |
| View | Download | 0.216 | d.16.1 | FAD-linked reductases, C-terminal domain |
| View | Download | 0.207 | a.13.1 | alpha-2-Macroglobulin receptor associated protein (RAP) domain 1 |
| View | Download | 0.200 | a.24.13 | Domain of the SRP/SRP receptor G-proteins |
|
Region A: Residues: [90-214] |
1 11 21 31 41 51
| | | | | |
1 IPGEVRMALV IRQDLGMTKG KIAAQCCHAA LSCFRHIATN PARASYNPIM TQRWLNAGQA 60
61 KITLKCPDKF TMDELYAKAI SLGVNAAVIH DAGRTQIAAG SATVLGLGPA PKAVLDQITG 120
121 DLKLY
|
| Detection Method: | |
| Confidence: | 55.920819 |
| Match: | PF01981 |
| Description: | Peptidyl-tRNA hydrolase PTH2 |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
| Term | Confidence | Notes |
| hydrolase activity | 1.21132922820114 | bayes_pls_golite062009 |
| hydrolase activity, acting on ester bonds | 0.567015167216622 | bayes_pls_golite062009 |
| catalytic activity | 0.534516847146079 | bayes_pls_golite062009 |
| aminoacyl-tRNA hydrolase activity | 0.436919034752024 | bayes_pls_golite062009 |
