| Protein: | UTP20 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 2493 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for UTP20.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1214..2493] | [1..1280] |
|
|
0.0 | [5..2477] | [3..2479] |
|
|
0.0 | [1132..2490] | [122..1477] |
|
|
0.0 | [15..2218] | [2..2174] |
|
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0.0 | [1661..2489] | [1..906] |
|
|
0.0 | [1696..2489] | [1..868] |
|
Region A: Residues: [1-351] |
1 11 21 31 41 51
| | | | | |
1 MAKQRQTTKS SKRYRYSSFK ARIDDLKIEP ARNLEKRVHD YVESSHFLAS FDQWKEINLS 60
61 AKFTEFAAEI EHDVQTLPQI LYHDKKIFNS LVSFINFHDE FSLQPLLDLL AQFCHDLGPD 120
121 FLKFYEEAIK TLINLLDAAI EFESSNVFEW GFNCLAYIFK YLSKFLVKKL VLTCDLLIPL 180
181 LSHSKEYLSR FSAEALSFLV RKCPVSNLRE FVRSVFEKLE GDDEQTNLYE GLLILFTESM 240
241 TSTQETLHSK AKAIMSVLLH EALTKSSPER SVSLLSDIWM NISKYASIES LLPVYEVMYQ 300
301 DFNDSLDATN IDRILKVLTT IVFSESGRKI PDWNKITILI ERIMSQSENC A
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [352-982] |
1 11 21 31 41 51
| | | | | |
1 SLSQDKVAFL FALFIRNSDV KTLTLFHQKL FNYALTNISD CFLEFFQFAL RLSYERVFSF 60
61 NGLKFLQLFL KKNWQSQGKK IALFFLEVDD KPELQKVREV NFPEEFILSI RDFFVTAEIN 120
121 DSNDLFEIYW RAIIFKYSKL QNTEIIIPLL ERIFSTFASP DNFTKDMVGT LLKIYRKEDD 180
181 ASGNNLLKTI LDNYENYKES LNFLRGWNKL VSNLHPSESL KGLMSHYPSL LLSLTDNFML 240
241 PDGKIRYETL ELMKTLMILQ GMQVPDLLSS CMVIEEIPLT LQNARDLTIR IKNVGAEFGK 300
301 TKTDKLVSSF FLKYLFGLLT VRFSPVWTGV FDTLPNVYTK DEALVWKLVL SFIKLPDENQ 360
361 NLDYYQPLLE DGANKVLWDS SVVRLRDTID TFSHIWSKYS TQNTSIISTT IERRGNTTYP 420
421 ILIRNQALKV MLSIPQVAEN HFVDIAPFVY NDFKTYKDEE DMENERVITG SWTEVDRNVF 480
481 LKTLSKFKNI KNVYSATELH DHLMVLLGSR NTDVQKLALD ALLAYKNPTL NKYRDNLKNL 540
541 LDDTLFKDEI TTFLTENGSQ SIKAEDEKVV MPYVLRIFFG RAQVPPTSGQ KRSRKIAVIS 600
601 VLPNFKKPYI NDFLSLASER LDYNYFFGNS H
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [983-1683] |
1 11 21 31 41 51
| | | | | |
1 QINSSKATLK TIRRMTGFVN IVNSTLSVLR TNFPLHTNSV LQPLIYSIAM AYYVLDTEST 60
61 EEVHLRKMAS NLRQQGLKCL SSVFEFVGNT FDWSTSMEDI YAVVVKPRIS HFSDENLQQP 120
121 SSLLRLFLYW AHNPSLYQFL YYDEFATATA LMDTISNQHV KEAVIGPIIE AADSIIRNPV 180
181 NDDHYVDLVT LICTSCLKIL PSLYVKLSDS NSISTFLNLL VSITEMGFIQ DDHVRSRLIS 240
241 SLISILKGKL KKLQENDTQK ILKILKLIVF NYNCSWSDIE ELYTTISSLF KTFDERNLRV 300
301 SLTELFIELG RKVPELESIS KLVADLNSYS SSRMHEYDFP RILSTFKGLI EDGYKSYSEL 360
361 EWLPLLFTFL HFINNKEELA LRTNASHAIM KFIDFINEKP NLNEASKSIS MLKDILLPNI 420
421 RIGLRDSLEE VQSEYVSVLS YMVKNTKYFT DFEDMAILLY NGDEEADFFT NVNHIQLHRR 480
481 QRAIKRLGEH AHQLKDNSIS HYLIPMIEHY VFSDDERYRN IGNETQIAIG GLAQHMSWNQ 540
541 YKALLRRYIS MLKTKPNQMK QAVQLIVQLS VPLRETLRIV RDGAESKLTL SKFPSNLDEP 600
601 SNFIKQELYP TLSKILGTRD DETIIERMPI AEALVNIVLG LTNDDITNFL PSILTNICQV 660
661 LRSKSEELRD AVRVTLGKIS IILGAEYLVF VIKELMATLK R
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [1684-2493] |
1 11 21 31 41 51
| | | | | |
1 GSQIHVLSYT VHYILKSMHG VLKHSDLDTS SSMIVKIIME NIFGFAGEEK DSENYHTKVK 60
61 EIKSNKSYDA GEILASNISL TEFGTLLSPV KALLMVRINL RNQNKLSELL RRYLLGLNHN 120
121 SDSESESILK FCHQLFQESE MSNSPQIPKK KVKDQVDEKE DFFLVNLESK SYTINSNSLL 180
181 LNSTLQKFAL DLLRNVITRH RSFLTVSHLE GFIPFLRDSL LSENEGVVIS TLRILITLIR 240
241 LDFSDESSEI FKNCARKVLN IIKVSPSTSS ELCQMGLKFL SAFIRHTDST LKDTALSYVL 300
301 GRVLPDLNEP SRQGLAFNFL KALVSKHIML PELYDIADTT REIMVTNHSK EIRDVSRSVY 360
361 YQFLMEYDQS KGRLEKQFKF MVDNLQYPTE SGRQSVMELI NLIITKANPA LLSKLSSSFF 420
421 LALVNVSFND DAPRCREMAS VLISTMLPKL ENKDLEIVEK YIAAWLKQVD NASFLNLGLR 480
481 TYKVYLKSIG FEHTIELDEL AIKRIRYILS DTSVGSEHQW DLVYSALNTF SSYMEATESV 540
541 YKHGFKDIWD GIITCLLYPH SWVRQSAANL VHQLIANKDK LEISLTNLEI QTIATRILHQ 600
601 LGAPSIPENL ANVSIKTLVN ISILWKEQRT PFIMDVSKQT GEDLKYTTAI DYMVTRIGGI 660
661 IRSDEHRMDS FMSKKACIQL LALLVQVLDE DEVIAEGEKI LLPLYGYLET YYSRAVDEEQ 720
721 EELRTLSNEC LKILEDKLQV SDFTKIYTAV KQTVLERRKE RRSKRAILAV NAPQISADKK 780
781 LRKHARSREK RKHEKDENGY YQRRNKRKRA
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [591-825] |
1 11 21 31 41 51
| | | | | |
1 LPDGKIRYET LELMKTLMIL QGMQVPDLLS SCMVIEEIPL TLQNARDLTI RIKNVGAEFG 60
61 KTKTDKLVSS FFLKYLFGLL TVRFSPVWTG VFDTLPNVYT KDEALVWKLV LSFIKLPDEN 120
121 QNLDYYQPLL EDGANKVLWD SSVVRLRDTI DTFSHIWSKY STQNTSIIST TIERRGNTTY 180
181 PILIRNQALK VMLSIPQVAE NHFVDIAPFV YNDFKTYKDE EDMENERVIT GSWTE
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [826-1037] |
1 11 21 31 41 51
| | | | | |
1 VDRNVFLKTL SKFKNIKNVY SATELHDHLM VLLGSRNTDV QKLALDALLA YKNPTLNKYR 60
61 DNLKNLLDDT LFKDEITTFL TENGSQSIKA EDEKVVMPYV LRIFFGRAQV PPTSGQKRSR 120
121 KIAVISVLPN FKKPYINDFL SLASERLDYN YFFGNSHQIN SSKATLKTIR RMTGFVNIVN 180
181 STLSVLRTNF PLHTNSVLQP LIYSIAMAYY VL
|
| Detection Method: | |
| Confidence: | 79.283997 |
| Match: | PF07539.3 |
| Description: | No description for PF07539.3 was found. |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [1038-1208] |
1 11 21 31 41 51
| | | | | |
1 DTESTEEVHL RKMASNLRQQ GLKCLSSVFE FVGNTFDWST SMEDIYAVVV KPRISHFSDE 60
61 NLQQPSSLLR LFLYWAHNPS LYQFLYYDEF ATATALMDTI SNQHVKEAVI GPIIEAADSI 120
121 IRNPVNDDHY VDLVTLICTS CLKILPSLYV KLSDSNSIST FLNLLVSITE M
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [1209-1317] |
1 11 21 31 41 51
| | | | | |
1 GFIQDDHVRS RLISSLISIL KGKLKKLQEN DTQKILKILK LIVFNYNCSW SDIEELYTTI 60
61 SSLFKTFDER NLRVSLTELF IELGRKVPEL ESISKLVADL NSYSSSRMH
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [1318-2197] |
1 11 21 31 41 51
| | | | | |
1 EYDFPRILST FKGLIEDGYK SYSELEWLPL LFTFLHFINN KEELALRTNA SHAIMKFIDF 60
61 INEKPNLNEA SKSISMLKDI LLPNIRIGLR DSLEEVQSEY VSVLSYMVKN TKYFTDFEDM 120
121 AILLYNGDEE ADFFTNVNHI QLHRRQRAIK RLGEHAHQLK DNSISHYLIP MIEHYVFSDD 180
181 ERYRNIGNET QIAIGGLAQH MSWNQYKALL RRYISMLKTK PNQMKQAVQL IVQLSVPLRE 240
241 TLRIVRDGAE SKLTLSKFPS NLDEPSNFIK QELYPTLSKI LGTRDDETII ERMPIAEALV 300
301 NIVLGLTNDD ITNFLPSILT NICQVLRSKS EELRDAVRVT LGKISIILGA EYLVFVIKEL 360
361 MATLKRGSQI HVLSYTVHYI LKSMHGVLKH SDLDTSSSMI VKIIMENIFG FAGEEKDSEN 420
421 YHTKVKEIKS NKSYDAGEIL ASNISLTEFG TLLSPVKALL MVRINLRNQN KLSELLRRYL 480
481 LGLNHNSDSE SESILKFCHQ LFQESEMSNS PQIPKKKVKD QVDEKEDFFL VNLESKSYTI 540
541 NSNSLLLNST LQKFALDLLR NVITRHRSFL TVSHLEGFIP FLRDSLLSEN EGVVISTLRI 600
601 LITLIRLDFS DESSEIFKNC ARKVLNIIKV SPSTSSELCQ MGLKFLSAFI RHTDSTLKDT 660
661 ALSYVLGRVL PDLNEPSRQG LAFNFLKALV SKHIMLPELY DIADTTREIM VTNHSKEIRD 720
721 VSRSVYYQFL MEYDQSKGRL EKQFKFMVDN LQYPTESGRQ SVMELINLII TKANPALLSK 780
781 LSSSFFLALV NVSFNDDAPR CREMASVLIS TMLPKLENKD LEIVEKYIAA WLKQVDNASF 840
841 LNLGLRTYKV YLKSIGFEHT IELDELAIKR IRYILSDTSV
|
| Detection Method: | |
| Confidence: | 2.65 |
| Match: | 2ie3A |
| Description: | No description for 2ie3A was found. |
| Term | Confidence | Notes |
| RNA binding | 3.36069436734718 | bayes_pls_golite062009 |
| binding | 2.36800795249393 | bayes_pls_golite062009 |
| nucleic acid binding | 1.59410102249793 | bayes_pls_golite062009 |
| structural molecule activity | 1.3916221897201 | bayes_pls_golite062009 |
| protein binding | 1.35895139229414 | bayes_pls_golite062009 |
| mRNA binding | 1.35186555044783 | bayes_pls_golite062009 |
| transcription regulator activity | 1.08645493064764 | bayes_pls_golite062009 |
| DNA binding | 0.956143892328242 | bayes_pls_golite062009 |
| transcription factor activity | 0.371244009721798 | bayes_pls_golite062009 |
|
Region A: Residues: [2198-2351] |
1 11 21 31 41 51
| | | | | |
1 GSEHQWDLVY SALNTFSSYM EATESVYKHG FKDIWDGIIT CLLYPHSWVR QSAANLVHQL 60
61 IANKDKLEIS LTNLEIQTIA TRILHQLGAP SIPENLANVS IKTLVNISIL WKEQRTPFIM 120
121 DVSKQTGEDL KYTTAIDYMV TRIGGIIRSD EHRM
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [2352-2493] |
1 11 21 31 41 51
| | | | | |
1 DSFMSKKACI QLLALLVQVL DEDEVIAEGE KILLPLYGYL ETYYSRAVDE EQEELRTLSN 60
61 ECLKILEDKL QVSDFTKIYT AVKQTVLERR KERRSKRAIL AVNAPQISAD KKLRKHARSR 120
121 EKRKHEKDEN GYYQRRNKRK RA
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
