| Protein: | SEO1 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 593 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SEO1.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..593] | [1..593] |
|
|
2.0E-86 | [132..570] | [21..491] |
|
|
2.0E-85 | [135..570] | [24..492] |
|
|
3.0E-85 | [131..570] | [18..490] |
|
|
2.0E-84 | [132..570] | [19..490] |
|
|
5.0E-83 | [78..571] | [8..529] |
|
Region A: Residues: [1-110] |
1 11 21 31 41 51
| | | | | |
1 MYSIVKEIIV DPYKRLKWGF IPVKRQVEDL PDDLNSTEIV TISNSIQSHE TAENFITTTS 60
61 EKDQLHFETS SYSEHKDNVN VTRSYEYRDE ADRPWWRFFD EQEYRINEKE
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [111-593] |
1 11 21 31 41 51
| | | | | |
1 RSHNKWYSWF KQGTSFKEKK LLIKLDVLLA FYSCIAYWVK YLDTVNINNA YVSGMKEDLG 60
61 FQGNDLVHTQ VMYTVGNIIF QLPFLIYLNK LPLNYVLPSL DLCWSLLTVG AAYVNSVPHL 120
121 KAIRFFIGAF EAPSYLAYQY LFGSFYKHDE MVRRSAFYYL GQYIGILSAG GIQSAVYSSL 180
181 NGVNGLEGWR WNFIIDAIVS VVVGLIGFYS LPGDPYNCYS IFLTDDEIRL ARKRLKENQT 240
241 GKSDFETKVF DIKLWKTIFS DWKIYILTLW NIFCWNDSNV SSGAYLLWLK SLKRYSIPKL 300
301 NQLSMITPGL GMVYLMLTGI IADKLHSRWF AIIFTQVFNI IGNSILAAWD VAEGAKWFAF 360
361 MLQCFGWAMA PVLYSWQNDI CRRDAQTRAI TLVTMNIMAQ SSTAWISVLV WKTEEAPRYL 420
421 KGFTFTACSA FCLSIWTFVV LYFYKRDERN NAKKNGIVLY NSKHGVEKPT SKDVETLSVS 480
481 DEK
|
| Detection Method: | |
| Confidence: | 62.30103 |
| Match: | 1ja5A_ |
| Description: | No description for 1ja5A_ was found. |
| Term | Confidence | Notes |
| substrate-specific transmembrane transporter activity | 5.46247398538901 | bayes_pls_golite062009 |
| ion transmembrane transporter activity | 4.58978526526921 | bayes_pls_golite062009 |
| transporter activity | 4.09176719149278 | bayes_pls_golite062009 |
| anion transmembrane transporter activity | 3.94605227012838 | bayes_pls_golite062009 |
| cation transmembrane transporter activity | 3.88180006470231 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 3.59744164024479 | bayes_pls_golite062009 |
| transmembrane transporter activity | 3.5865018981083 | bayes_pls_golite062009 |
| inorganic anion transmembrane transporter activity | 2.52916479889426 | bayes_pls_golite062009 |
| organic acid transmembrane transporter activity | 2.15783210522667 | bayes_pls_golite062009 |
| active transmembrane transporter activity | 1.59419818573076 | bayes_pls_golite062009 |
| secondary active transmembrane transporter activity | 1.22264637452409 | bayes_pls_golite062009 |
| polyol transmembrane transporter activity | 0.924836669821548 | bayes_pls_golite062009 |
| alcohol transmembrane transporter activity | 0.924836669821548 | bayes_pls_golite062009 |
| binding | 0.873217664940684 | bayes_pls_golite062009 |
| glycerol transmembrane transporter activity | 0.812001619402678 | bayes_pls_golite062009 |
| symporter activity | 0.74591237387473 | bayes_pls_golite062009 |
| solute:cation symporter activity | 0.74591237387473 | bayes_pls_golite062009 |
| phosphate transmembrane transporter activity | 0.312628600969375 | bayes_pls_golite062009 |
| cation:sugar symporter activity | 0.143419068761182 | bayes_pls_golite062009 |
| sugar:hydrogen symporter activity | 0.143419068761182 | bayes_pls_golite062009 |
