| Protein: | SPC72 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 622 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPC72.
| Description | E-value | Query Range |
Subject Range |
|
|
3.0E-65 | [4..612] | [1267..1865] |
|
|
5.0E-65 | [4..612] | [1268..1866] |
|
|
1.0E-64 | [4..612] | [284..882] |
|
|
1.0E-64 | [4..612] | [1273..1871] |
|
|
2.0E-64 | [4..612] | [1269..1867] |
|
|
4.0E-64 | [2..612] | [216..820] |
|
Region A: Residues: [1-216] |
1 11 21 31 41 51
| | | | | |
1 MVRRWIPSGR HLRNNDNTGD DDDSEFTNSM DSGMSIPSLR DSMTTRSSHN DPIKPALMND 60
61 SNKVKNLEKE LTNAKIKIQV LYEYIRRIPN KDGNAPSLGN DTDFRNSIIE GLNLEINKLK 120
121 QDLKAKEVEY QDTLQFVQEN LENSESIVNT INHLLSFILT HFNEQDENAH LLDKEERETL 180
181 EETLELSSDY VLEKMDTLSK FIIQFLQDFL HSKSRA
|
| Detection Method: |  |
| Confidence: | 14.0 |
| Match: | 1i84S_ |
| Description: | Heavy meromyosin subfragment |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [217-280] |
1 11 21 31 41 51
| | | | | |
1 ESKQDKEEFL SLAQSSPAGS QLESRDSPSS KEENTDGGYQ NDEIHDSNNH IDTENVMANS 60
61 TSLP
|
| Detection Method: | |
| Confidence: | 9.69897 |
| Match: | 2tmaA_ |
| Description: | Tropomyosin |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [281-362] |
1 11 21 31 41 51
| | | | | |
1 ISAVESRFEK TLDTQLEIVI EILHKEYDQF INSIRLKFEK SQKLEKIIAS KLNEQSHLLD 60
61 SLELEENSSS VIEKQDHLIS QL
|
| Detection Method: | |
| Confidence: | 9.69897 |
| Match: | 2tmaA_ |
| Description: | Tropomyosin |
| Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [363-423] |
1 11 21 31 41 51
| | | | | |
1 KEKIESQSVL INNLEKLKED IIKMKQNEKV LTKELETQTK INKLKENNWD SYINDLEKQI 60
61 N
|
| Detection Method: | |
| Confidence: | 9.69897 |
| Match: | 2tmaA_ |
| Description: | Tropomyosin |
| Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [424-504] |
1 11 21 31 41 51
| | | | | |
1 DLQIDKSEEF HVIQNQLDKL DLENYQLKNQ LNTLDNQKLI LSQYESNFIK FNQNLLLHLD 60
61 SIFNILQKIL QESSIAQFDR K
|
| Detection Method: | |
| Confidence: | 9.69897 |
| Match: | 2tmaA_ |
| Description: | Tropomyosin |
| Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [505-622] |
1 11 21 31 41 51
| | | | | |
1 MKSIKSVPNA LKNLNLIQPK LESLYTFIET ALESIINSYI SSLISMETPE QPHQQGNELT 60
61 ATPNKELTLR IEELQRRWIS ERERRKLDAN ASEARIKALE QENESLRSKL FNLSINNP
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
