Protein: | SPC72 |
Organism: | Saccharomyces cerevisiae |
Length: | 622 amino acids |
Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPC72.
Description | E-value | Query Range |
Subject Range |
|
3.0E-65 | [4..612] | [1267..1865] |
|
5.0E-65 | [4..612] | [1268..1866] |
|
1.0E-64 | [4..612] | [284..882] |
|
1.0E-64 | [4..612] | [1273..1871] |
|
2.0E-64 | [4..612] | [1269..1867] |
|
4.0E-64 | [2..612] | [216..820] |
Region A: Residues: [1-216] |
1 11 21 31 41 51 | | | | | | 1 MVRRWIPSGR HLRNNDNTGD DDDSEFTNSM DSGMSIPSLR DSMTTRSSHN DPIKPALMND 60 61 SNKVKNLEKE LTNAKIKIQV LYEYIRRIPN KDGNAPSLGN DTDFRNSIIE GLNLEINKLK 120 121 QDLKAKEVEY QDTLQFVQEN LENSESIVNT INHLLSFILT HFNEQDENAH LLDKEERETL 180 181 EETLELSSDY VLEKMDTLSK FIIQFLQDFL HSKSRA |
Detection Method: | ![]() |
Confidence: | 14.0 |
Match: | 1i84S_ |
Description: | Heavy meromyosin subfragment |
Matching Structure (courtesy of the PDB):![]() |
Region A: Residues: [217-280] |
1 11 21 31 41 51 | | | | | | 1 ESKQDKEEFL SLAQSSPAGS QLESRDSPSS KEENTDGGYQ NDEIHDSNNH IDTENVMANS 60 61 TSLP |
Detection Method: | ![]() |
Confidence: | 9.69897 |
Match: | 2tmaA_ |
Description: | Tropomyosin |
Matching Structure (courtesy of the PDB):![]() |
Region A: Residues: [281-362] |
1 11 21 31 41 51 | | | | | | 1 ISAVESRFEK TLDTQLEIVI EILHKEYDQF INSIRLKFEK SQKLEKIIAS KLNEQSHLLD 60 61 SLELEENSSS VIEKQDHLIS QL |
Detection Method: | ![]() |
Confidence: | 9.69897 |
Match: | 2tmaA_ |
Description: | Tropomyosin |
Matching Structure (courtesy of the PDB):![]() |
Region A: Residues: [363-423] |
1 11 21 31 41 51 | | | | | | 1 KEKIESQSVL INNLEKLKED IIKMKQNEKV LTKELETQTK INKLKENNWD SYINDLEKQI 60 61 N |
Detection Method: | ![]() |
Confidence: | 9.69897 |
Match: | 2tmaA_ |
Description: | Tropomyosin |
Matching Structure (courtesy of the PDB):![]() |
Region A: Residues: [424-504] |
1 11 21 31 41 51 | | | | | | 1 DLQIDKSEEF HVIQNQLDKL DLENYQLKNQ LNTLDNQKLI LSQYESNFIK FNQNLLLHLD 60 61 SIFNILQKIL QESSIAQFDR K |
Detection Method: | ![]() |
Confidence: | 9.69897 |
Match: | 2tmaA_ |
Description: | Tropomyosin |
Matching Structure (courtesy of the PDB):![]() |
Region A: Residues: [505-622] |
1 11 21 31 41 51 | | | | | | 1 MKSIKSVPNA LKNLNLIQPK LESLYTFIET ALESIINSYI SSLISMETPE QPHQQGNELT 60 61 ATPNKELTLR IEELQRRWIS ERERRKLDAN ASEARIKALE QENESLRSKL FNLSINNP |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
View | Download | 0.577 | 0.057 | mitotic spindle elongation | a.24.3 | Cytochromes |
View | Download | 0.688 | 0.023 | mitotic spindle elongation | a.24.14 | FAT domain of focal adhesion kinase |
View | Download | 0.681 | 0.007 | mitotic spindle elongation | f.36.1 | Neurotransmitter-gated ion-channel pransmembrane pore |
View | Download | 0.610 | 0.007 | mitotic spindle elongation | a.24.1 | Apolipoprotein |
View | Download | 0.543 | 0.006 | mitotic spindle elongation | a.7.6 | Ribosomal protein S20 |
View | Download | 0.535 | N/A | N/A | d.122.1 | ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase |
View | Download | 0.516 | N/A | N/A | a.47.2 | t-snare proteins |
View | Download | 0.516 | N/A | N/A | a.29.2 | Bromodomain |
View | Download | 0.495 | N/A | N/A | a.24.9 | alpha-catenin/vinculin |
View | Download | 0.470 | N/A | N/A | i.11.1 | Computational models partly based on NMR data |
View | Download | 0.447 | N/A | N/A | a.47.2 | t-snare proteins |
View | Download | 0.445 | N/A | N/A | a.4.5 | "Winged helix" DNA-binding domain |
View | Download | 0.418 | N/A | N/A | a.7.1 | Spectrin repeat |
View | Download | 0.417 | N/A | N/A | a.4.1 | Homeodomain-like |
View | Download | 0.404 | N/A | N/A | a.24.9 | alpha-catenin/vinculin |
View | Download | 0.400 | N/A | N/A | a.4.5 | "Winged helix" DNA-binding domain |
View | Download | 0.399 | N/A | N/A | a.47.2 | t-snare proteins |
View | Download | 0.397 | N/A | N/A | a.47.2 | t-snare proteins |
View | Download | 0.397 | N/A | N/A | a.45.1 | Glutathione S-transferase (GST), C-terminal domain |
View | Download | 0.381 | N/A | N/A | f.14.1 | Voltage-gated potassium channels |
View | Download | 0.372 | N/A | N/A | a.78.1 | Fatty acid responsive transcription factor FadR, C-terminal domain |
View | Download | 0.365 | N/A | N/A | a.71.2 | Helical domain of Sec23/24 |
View | Download | 0.361 | N/A | N/A | a.91.1 | Regulator of G-protein signalling, RGS |
View | Download | 0.359 | N/A | N/A | a.24.3 | Cytochromes |
View | Download | 0.348 | N/A | N/A | a.24.3 | Cytochromes |
View | Download | 0.343 | N/A | N/A | a.45.1 | Glutathione S-transferase (GST), C-terminal domain |
View | Download | 0.339 | N/A | N/A | a.24.7 | FKBP12-rapamycin-binding domain of FKBP-rapamycin-associated protein (FRAP) |
View | Download | 0.338 | N/A | N/A | a.24.4 | Hemerythrin |
View | Download | 0.336 | N/A | N/A | d.56.1 | GroEL-intermediate domain like |
View | Download | 0.326 | N/A | N/A | a.24.1 | Apolipoprotein |
View | Download | 0.323 | N/A | N/A | d.95.2 | Homing endonucleases |
View | Download | 0.321 | N/A | N/A | a.24.1 | Apolipoprotein |
View | Download | 0.317 | N/A | N/A | a.4.1 | Homeodomain-like |
View | Download | 0.315 | N/A | N/A | a.73.1 | Retrovirus capsid protein, N-terminal core domain |
View | Download | 0.315 | N/A | N/A | a.80.1 | DNA polymerase III clamp loader subunits, C-terminal domain |
View | Download | 0.312 | N/A | N/A | a.130.1 | Chorismate mutase II |
View | Download | 0.307 | N/A | N/A | a.2.11 | Fe,Mn superoxide dismutase (SOD), N-terminal domain |
View | Download | 0.307 | N/A | N/A | a.24.1 | Apolipoprotein |
View | Download | 0.304 | N/A | N/A | a.7.2 | Enzyme IIa from lactose specific PTS, IIa-lac |
View | Download | 0.301 | N/A | N/A | a.27.1 | Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases |
View | Download | 0.301 | N/A | N/A | f.21.2 | Fumarate reductase respiratory complex transmembrane subunits |
View | Download | 0.300 | N/A | N/A | d.198.1 | Type III secretory system chaperone |
View | Download | 0.297 | N/A | N/A | f.14.1 | Voltage-gated potassium channels |
View | Download | 0.296 | N/A | N/A | a.74.1 | Cyclin-like |
View | Download | 0.295 | N/A | N/A | a.24.9 | alpha-catenin/vinculin |
View | Download | 0.286 | N/A | N/A | a.7.5 | Tubulin chaperone cofactor A |
View | Download | 0.285 | N/A | N/A | d.56.1 | GroEL-intermediate domain like |
View | Download | 0.281 | N/A | N/A | a.7.1 | Spectrin repeat |
View | Download | 0.279 | N/A | N/A | f.36.1 | Neurotransmitter-gated ion-channel pransmembrane pore |
View | Download | 0.276 | N/A | N/A | d.6.1 | Prion-like |
View | Download | 0.275 | N/A | N/A | a.24.7 | FKBP12-rapamycin-binding domain of FKBP-rapamycin-associated protein (FRAP) |
View | Download | 0.274 | N/A | N/A | a.7.7 | BAG domain |
View | Download | 0.271 | N/A | N/A | f.21.2 | Fumarate reductase respiratory complex transmembrane subunits |
View | Download | 0.268 | N/A | N/A | b.91.1 | E2 regulatory, transactivation domain |
View | Download | 0.268 | N/A | N/A | a.7.5 | Tubulin chaperone cofactor A |
View | Download | 0.268 | N/A | N/A | d.2.1 | Lysozyme-like |
View | Download | 0.267 | N/A | N/A | a.1.1 | Globin-like |
View | Download | 0.266 | N/A | N/A | a.24.3 | Cytochromes |
View | Download | 0.266 | N/A | N/A | a.1.1 | Globin-like |
View | Download | 0.260 | N/A | N/A | a.7.5 | Tubulin chaperone cofactor A |
View | Download | 0.253 | N/A | N/A | a.24.10 | Histidine-containing phosphotransfer domain, HPT domain |
View | Download | 0.252 | N/A | N/A | f.1.4 | Bcl-2 inhibitors of programmed cell death |
View | Download | 0.252 | N/A | N/A | f.21.2 | Fumarate reductase respiratory complex transmembrane subunits |
View | Download | 0.250 | N/A | N/A | d.110.4 | SNARE-like |
View | Download | 0.248 | N/A | N/A | a.63.1 | Apolipophorin-III |
View | Download | 0.244 | N/A | N/A | d.52.7 | Ribosome-binding factor A, RbfA |
View | Download | 0.243 | N/A | N/A | a.22.1 | Histone-fold |
View | Download | 0.239 | N/A | N/A | a.23.1 | HSC20 (HSCB), C-terminal oligomerisation domain |
View | Download | 0.237 | N/A | N/A | i.11.1 | Computational models partly based on NMR data |
View | Download | 0.236 | N/A | N/A | a.48.1 | N-terminal domain of cbl (N-cbl) |
View | Download | 0.236 | N/A | N/A | a.29.2 | Bromodomain |
View | Download | 0.234 | N/A | N/A | a.74.1 | Cyclin-like |
View | Download | 0.233 | N/A | N/A | f.1.3 | delta-Endotoxin (insectocide), N-terminal domain |
View | Download | 0.230 | N/A | N/A | a.45.1 | Glutathione S-transferase (GST), C-terminal domain |
View | Download | 0.228 | N/A | N/A | f.1.4 | Bcl-2 inhibitors of programmed cell death |
View | Download | 0.223 | N/A | N/A | f.14.1 | Voltage-gated potassium channels |
View | Download | 0.223 | N/A | N/A | a.7.1 | Spectrin repeat |
View | Download | 0.219 | N/A | N/A | g.44.1 | RING/U-box |
View | Download | 0.219 | N/A | N/A | a.24.10 | Histidine-containing phosphotransfer domain, HPT domain |
View | Download | 0.219 | N/A | N/A | a.78.1 | Fatty acid responsive transcription factor FadR, C-terminal domain |
View | Download | 0.218 | N/A | N/A | a.2.11 | Fe,Mn superoxide dismutase (SOD), N-terminal domain |
View | Download | 0.218 | N/A | N/A | d.185.1 | LuxS/MPP-like metallohydrolase |
View | Download | 0.217 | N/A | N/A | a.18.1 | T4 endonuclease V |
View | Download | 0.216 | N/A | N/A | a.24.12 | Outer surface protein C (OspC) |
View | Download | 0.216 | N/A | N/A | a.47.2 | t-snare proteins |
View | Download | 0.214 | N/A | N/A | a.121.1 | Tetracyclin repressor-like, C-terminal domain |
View | Download | 0.214 | N/A | N/A | d.49.1 | Signal recognition particle alu RNA binding heterodimer, SRP9/14 |
View | Download | 0.212 | N/A | N/A | a.24.3 | Cytochromes |
View | Download | 0.211 | N/A | N/A | a.24.1 | Apolipoprotein |
View | Download | 0.210 | N/A | N/A | a.1.1 | Globin-like |
View | Download | 0.209 | N/A | N/A | a.25.1 | Ferritin-like |
View | Download | 0.209 | N/A | N/A | f.14.1 | Voltage-gated potassium channels |
View | Download | 0.208 | N/A | N/A | a.4.5 | "Winged helix" DNA-binding domain |
View | Download | 0.206 | N/A | N/A | a.7.7 | BAG domain |
View | Download | 0.205 | N/A | N/A | i.11.1 | Computational models partly based on NMR data |
View | Download | 0.201 | N/A | N/A | a.24.9 | alpha-catenin/vinculin |
View | Download | 0.201 | N/A | N/A | a.24.9 | alpha-catenin/vinculin |
View | Download | 0.201 | N/A | N/A | a.45.1 | Glutathione S-transferase (GST), C-terminal domain |