| Protein: | LTE1 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 1435 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for LTE1.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..1435] | [1..1435] |
|
|
0.0 | [989..1434] | [823..1253] |
|
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0.0 | [989..1434] | [821..1251] |
|
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0.0 | [989..1434] | [812..1235] |
|
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0.0 | [989..1434] | [812..1235] |
|
Region A: Residues: [1-121] |
1 11 21 31 41 51
| | | | | |
1 MEIFSQKDYY PTPSSNVISY ESDCVSKPVN SADLPALIVH LSSPLEGVDY NASADFFLIY 60
61 RNFITPQDLH DLLIYRFRWC IREITTNAAK AKRRRIGEVA LVRTFVLLRH SILNYFVQDF 120
121 L
|
| Detection Method: |  |
| Confidence: | 23.154902 |
| Match: | PF00618 |
| Description: | Guanine nucleotide exchange factor for Ras-like GTPases; N-terminal motif |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [122-963] |
1 11 21 31 41 51
| | | | | |
1 PNITLRLRLI EFLNDKHIEQ YPKIISSCII NLKKNWVHCS KLVWENIELN EPDKLDFDAW 60
61 LHYSLKDFTQ LESLHKRGSR LSIYARQSFA SPDFRNQSVL SLYKTSDVFR LPEKLQSSNS 120
121 SKNQRSPSML LFPDNTSNVY SKHRIAKEPS VDNESEDMSD SKQKISHLSK VTLVSTLMKG 180
181 VDYPSSYAVD KIMPPTPAKK VEFILNSLYI PEDLNEQSGT LQGTSTTSSL DNNSNSNSRS 240
241 NTSSMSVLHR SAIGLLAKWM KNHNRHDSSN DKKFMSAIKP ANQKPEMDAF VKYVVSISSL 300
301 NRKSSKEEEE EFLNSDSSKF DILSARTIDE VESLLHLQNQ LIEKVQTHSN NNRGPTVNVD 360
361 CERREHIHDI KILQQNSFKP SNDNFSAMDN LDLYQTVSSI AQSVISLTNT LNKQLQNNES 420
421 NMQPSPSYDA LQRRKVKSLT TAYYNKMHGS YSAESMRLFD KDNSSSRTDE NGPQRLLFHE 480
481 TDKTNSEAIT NMTPRRKNHS QSQKSMTSSP LKNVLPDLKE SSPLNDSRED TESITYSYDS 540
541 ELSSSSPPRD TVTKKSRKVR NIVNNTDSPT LKTKTGFLNL REFTFEDTKS LDEKKSTIDG 600
601 LEKNYDNKEN QESEYESTKK LDNSLDASSE ANNYDITTRK KHSSCNHKIK QAVVRPASGR 660
661 ISISRVQSIA ITPTKELSIV DPEQNKSNSV IEEISEIEPL NLEYNKKSAL YSDTSSTVIS 720
721 ISTSKLFESA QNSPLKQTQN PQREFPNGTS VSETNRIRLS IAPTIESVVS DLNSITTGST 780
781 VETFETSRDL PVPHQRIINL REEYQRGNQD IISNTSSLHE LKTIDLSDSN NDLESPSTHA 840
841 KN
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [964-1090] |
1 11 21 31 41 51
| | | | | |
1 NKYFFSPDDG SIDVASPMKN VEELKSKFLK NESETNSNIS GSVLTMDDID INDTSSARNT 60
61 RRANSESAFT GSLNKKNLNE IANMLDDSIN DDPITVALMK LEGTYEKIPE KPENTKSSDA 120
121 IGIKTSK
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.406 | 0.181 | cellular bud | a.45.1 | Glutathione S-transferase (GST), C-terminal domain |
| View | Download | 0.262 | N/A | N/A | a.47.2 | t-snare proteins |
| View | Download | 0.215 | N/A | N/A | a.91.1 | Regulator of G-protein signalling, RGS |
|
Region A: Residues: [1091-1161] |
1 11 21 31 41 51
| | | | | |
1 LADEVEMLNL NNLPSFQNSP AEKRKSLLIE RRRQTIMNIP FTPDQSEKEG FTSSSPEKID 60
61 VSANVDVAVQ A
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.346 | a.22.1 | Histone-fold |
| View | Download | 0.266 | a.56.1 | CO dehydrogenase ISP C-domain like |
| View | Download | 0.297 | a.24.17 | Group V grass pollen allergen |
| View | Download | 0.406 | a.45.1 | Glutathione S-transferase (GST), C-terminal domain |
| View | Download | 0.338 | a.76.1 | Iron-dependent represor protein, dimerization domain |
| View | Download | 0.333 | a.76.1 | Iron-dependent represor protein, dimerization domain |
| View | Download | 0.319 | a.45.1 | Glutathione S-transferase (GST), C-terminal domain |
| View | Download | 0.279 | a.45.1 | Glutathione S-transferase (GST), C-terminal domain |
| View | Download | 0.275 | a.45.1 | Glutathione S-transferase (GST), C-terminal domain |
| View | Download | 0.273 | a.45.1 | Glutathione S-transferase (GST), C-terminal domain |
| View | Download | 0.252 | a.69.1 | C-terminal domain of alpha and beta subunits of F1 ATP synthase |
| View | Download | 0.252 | a.24.13 | Domain of the SRP/SRP receptor G-proteins |
| View | Download | 0.222 | a.58.1 | Chemotaxis receptor methyltransferase CheR, N-terminal domain |
| View | Download | 0.219 | a.22.1 | Histone-fold |
|
Region A: Residues: [1162-1435] |
1 11 21 31 41 51
| | | | | |
1 AQIQELIGQY RIHDSRLMIS NNESHVPFIL MYDSLSVAQQ MTLIEKEILG EIDWKDLLDL 60
61 KMKHEGPQVI SWLQLLVRNE TLSGIDLAIS RFNLTVDWII SEILLTKSSK MKRNVIQRFI 120
121 HVADHCRTFQ NFNTLMEIIL ALSSSVVQKF TDAWRLIEPG DLLTWEELKK IPSLDRNYST 180
181 IRNLLNSVNP LVGCVPFIVV YLSDLSANAE KKDWILEDKV VNYNKFDTNV QIVKNFIQRV 240
241 QWSKFYTFKV NHELLSKCVY ISTLTQEEIN ELST
|
| Detection Method: | |
| Confidence: | 109.457575 |
| Match: | 1bkdS_ |
| Description: | Son of sevenless protein homolog 1 (sos-1) |
Matching Structure (courtesy of the PDB): |
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