| Protein: | AI3 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 403 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for AI3.
| Description | E-value | Query Range |
Subject Range |
|
|
251.0 | [0..1] | [403..1] |
|
Region A: Residues: [1-114] |
1 11 21 31 41 51
| | | | | |
1 MVQRWLYSTN AKDIAVLYFM LAIFSGMAGT AMSLIIRLEL AAPGSQYLHG NSQLFNVLVM 60
61 PALIGGFGNQ KRYESNNNNN QVMENKEYNL KLNYDKLGPY LAGLIEGDGT ITVQ
|
| Detection Method: |  |
| Confidence: | 44.522879 |
| Match: | 1occA |
| Description: | Mitochondrial cytochrome c oxidase, subunit I |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [115-403] |
1 11 21 31 41 51
| | | | | |
1 NSSSMKKSKY RPLIVVVFKL EDLELANYLC NLTKCGKVYK KINRNYVLWT IHDLKGVYTL 60
61 LNIINGYMRT PKYEAFVRGA EFMNNYINST TITHNKLKNM DNIKIKPLDT SDIGSNAWLA 120
121 GMTDADGNFS INLMNGKNRS SRAMPYYCLE LRQNYQKNSN NNNINFSYFY IMSAIATYFN 180
181 VNLYSRERNL NLLVSTNNTY KTYYSYKVMV ANTYKNIKVM EYFNKYSLLS SKHLDFLDWS 240
241 KLVILINNEG QSMKTNGSWE LGMNLRKDYN KTRTTFTWSH LKNTYLENK
|
| Detection Method: | |
| Confidence: | 16.154902 |
| Match: | 1p8kZ |
| Description: | The structure and DNA recognition of a bifunctional homing endonuclease and group I intron splicing factor |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| nuclease activity | 1.30590086180382 | bayes_pls_golite062009 |
| catalytic activity | 1.00294942392567 | bayes_pls_golite062009 |
| binding | 0.947409481120466 | bayes_pls_golite062009 |
| hydrolase activity | 0.908706495902542 | bayes_pls_golite062009 |
| endonuclease activity | 0.892525491806151 | bayes_pls_golite062009 |
| hydrolase activity, acting on ester bonds | 0.861094108940112 | bayes_pls_golite062009 |
| nucleic acid binding | 0.59572260756409 | bayes_pls_golite062009 |
| DNA binding | 0.156232940245275 | bayes_pls_golite062009 |
