| Protein: | HRD1_SCHPO |
| Organism: | Schizosaccharomyces pombe 972h- |
| Length: | 677 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for HRD1_SCHPO.
| Description | E-value | Query Range |
Subject Range |
|
|
390.0 | [0..1] | [457..2] |
|
|
389.0 | [0..1] | [675..1] |
|
|
384.0 | [0..1] | [363..2] |
|
|
381.0 | [0..1] | [382..1] |
|
|
378.0 | [0..2] | [400..3] |
|
Region A: Residues: [1-198] |
1 11 21 31 41 51
| | | | | |
1 MKFILYVLAS LVLFGLSVLL SLYSSANVYS ATVMISQSPV HITIGLNVCL CLFFAIANAL 60
61 KTLLFGSLQT FELELLYEQF WITLTEIMLA ITVFREAISI SFFMLLSTLM FARVFHSICS 120
121 FRTERLQIQL TDQRFHIFSR LTCAYFVLSI LDASLIYLCF TSEHLGDKST RMLFVCEFSV 180
181 LLLNLTIEAS KLCIYLYE
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [199-292] |
1 11 21 31 41 51
| | | | | |
1 ARHLDQVWDE KSTYLFRLEV CRDGLRLLAY SLLFMYQFPY VSVPIYSIRQ MYTCFYSLFR 60
61 RIREHARFRQ ATRDMNAMYP TATEEQLTNS DRTC
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [293-360] |
1 11 21 31 41 51
| | | | | |
1 TICREEMFHP DHPPENTDEM EPLPRGLDMT PKRLPCGHIL HFHCLRNWLE RQQTCPICRR 60
61 SVIGNQSS
|
| Detection Method: | |
| Confidence: | 4.30103 |
| Match: | 2eclA |
| Description: | No description for 2eclA was found. |
|
Region A: Residues: [361-498] |
1 11 21 31 41 51
| | | | | |
1 PTGIPASPNV RATQIATQVP NPQNTPTTTA VPGITNSSNQ GDPQASTFNG VPNANSSGFA 60
61 AHTQDLSSVI PRRIALRDGW TMLPIPGTRR IPTYSQSTST TNPSATPTTG DPSNSTYGGP 120
121 QTFPNSGNNP NFNRGIAG
|
| Detection Method: | |
| Confidence: | 1.37 |
| Match: | 1wckA |
| Description: | Crystal structure of the C-terminal domain of BclA, the major antigen of the exosporium of the Bacillus anthracis spore. |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [499-677] |
1 11 21 31 41 51
| | | | | |
1 IVPPGWRLVS SNTQSLSTNS AMTSLYQNAS SADNNLGSSL PNVVPLSRGL TQSNETSNTF 60
61 PAASSNISSQ LRELHTKIDE LRETVSNFRA DYNSIRTSLN QLEAASGINE RIQTTSADSL 120
121 LNSNGMSGTE GFENTQTSIT TNDNQSSILT SSDQTSPFAT DEDRQNSRNV QLETVDENF
|
| Detection Method: | |
| Confidence: | 3.221849 |
| Match: | 1deqA |
| Description: | Fibrinogen |
Matching Structure (courtesy of the PDB): |
|
